| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2210 |
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| Symbol | |
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| ID | 3965448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2812204 |
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| End bp | 2814618 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921300 |
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| Product | ribonuclease III |
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| Protein accession | YP_527682 |
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| Protein GI | 90021855 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE
[COG4786] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTCG ATACAGCCTT AAGCGGTATT CGCGCCGCCT CCAGTGACCT GTCTGTAACA
GGTAATAATA TCGCTAACGC GTCTACCACT GGTTTTAAAG CATCGCGCGC GGAATTTGGC
GATGTATATG CTACCTCGGT GCTGGGTGCC GGTGTGAATG CGATAGGTAG CGGTGTGCAA
GTCCAGGAAG TTGCGCAGCG TTTTAGTCAG GGCAACGTAG GTTTTACCGA AAACGAGCTG
GATCTTGCTA TTAACGGTAA TGGTTTTTTT GTTGTGAGCC AGCAAGGGGA AACACTCTAC
ACTCGAGCAG GTAGTTTTGG GTTAGATGAC GAAGGCTATG TGGTAAATAA CACGGGTGCA
GTTTTGCAAG GCTTTTCGGC CGATGGAGCG GGTAATATAG GCGGTATTCA AGGTGATATT
AGAATACAAA CCAGCAACCT TGCGCCAAGA CAAACGACAG GTGTCGAGTC GTTGTTAAAT
TTAGATTCTA CCGAGCCGGT ATTGCAGACT ATTGGCGCGG AGTTTTCTAC GGCGGGTACT
GCAGTTGGTG TTACGCAGAT AGGGCGTCAA ACCGCTGAAA AATCAACTCT ATTGATGGAT
GCAATTACGT TCCCTATCCA AAACTTAGAT ACTAACCCAA TTATTTTCGA TATTACTCTT
GCTGGGCCAA CAGTTGGTAA TAATGGCACG GTTACTATTA ACTTAGATTC TATAGATTTC
TCTACATCGA TAGACGACCT AACCGAACTA CAGCAAATAG TTTCGTCAAT TAATTCGCAA
CTATATTCGC CAAACGGCGG AGCGGACCCC ATCGATGTAG TAGCTTCAGT TGGCACCGAT
GGATTGGGTA ACCCGGCTAT TTTGTTTGAA TCTATATACG AGGGTGAGCT TACCGATATT
TCCATTTCAA TCGATCCAGC GAGCGACCCA GGTAACGTAG CGGCATTGGG TTTAGATGAT
ACGAACGTGG GTACGACGGG TATTCCCTCC GTTTCTAATG GTTACCCCTT GCAAACAGTC
GATATTGTAG GTCCTGATGG CAATATCGTG CCATTTTCTA TTCCCGCAGG CGCCGAAGCA
GCTTCTACTG CATCGCGATT AAATGAGCTG CCTGGCATTT CAGCTACTGC ACGGTCTGAG
GCTACTCTTT CGGGGTTTAC AAATGCCAGT GGTAATATTG TTGTTTCCGT TAACGACATA
GCCTTAGTTG TTGATGATTT AGCAGATTTA GAAGCGGAAA TTAACGCGCT TTCTACCAGT
TCTCTCGCGG GTATTACAGC AACAGTAAAT GCTGCTGGTA CGGCCATTAC TGTCACGTCG
GCGGTTGGTA AAGATTTGAA ATTTGCCGTT AGTGGCGGTG CGGGGGATGC AATTACCGTG
CAGGGCTCCA CTTTATCGGC CGCGCAAACT ATTACAGCCG GTGGCAATGG TGATACCGAT
GCTATTGTTG TTGGTGGTGC AATAGATATG GTTTTGGAAG AGGGATACTC ACTAGAGAAC
GCAGTGCCCC AGCTTACAGG TATATTCCAA CCTTTTACCG CGAATGAGTT TACCCCCATA
GTTATCAATG CGTTTGATCC CACAGATCAG TCTACCTATA ACAGCGCTAC CTCGATGACT
ATTTACGATA GTTTGGGTAA CTCGCACGTT ATGACCCAGT ATTTTGTTAA ACAAGATTAC
GATGCAACAG ACCCAACCTC TGTGCCCAAC CATTGGGTAA TGTACGCACG TATTGATGAT
GCCGATGTGG GCGACCCCGA TACAACTTTG CCACCGCCTG CTAATACGCA GCCTACACTG
GCAAGTTACG ATGTGTATTT TAACGAGGAT GGTTCGCTCA ATACTTTATT AACTTCCGAT
ATGCTTATCT CAAACTGGAC GCCAGTGGAT GCAGATGGCA ACCCTAATGG TGCCTTGGGG
CCTCAGAATA TTTTGGCTGG CGGTACTCAA ACTGTTGTTG AGCCACCTAC AAGCTCAAAC
TTCGTGATCT CGCTTGAGGG TACCACGCAG TTTGGCTCAG AGTTTTCTGT AAACGATATT
AGCCAAAACG GGTTTTCTAC TGGCCGCTTA TCGGGGCTAA ATATTGCCGA TAACGGGACG
ATCTTTGCCC GTTTTACCAA CGGCCAATCG TTAAGGTTGG GGCAAGTTGT GCTAGCAGAC
TTTTCTAATC AGCAGGGTTT GCAGCCAACC GGTAATACCA TGTGGGCAGA AACATTTGAG
TCAGGTTCAC CGAATGTGGG TACTCCAGGT AGTGCGGCAT TAGGTGCGGT ACAAGCAGGA
GCGTTAGAAG AATCTAATGT AGACCTCTCT GAACAGCTGG TTAACCTTAT TATTGCGCAG
CGCAATTTCC AAGCCAGCGC AAAAACCATC GAAACGGCCG ATGCCGTAAC CCAAACAATT
ATTAACTTAA GATAA
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| Protein sequence | MPFDTALSGI RAASSDLSVT GNNIANASTT GFKASRAEFG DVYATSVLGA GVNAIGSGVQ
VQEVAQRFSQ GNVGFTENEL DLAINGNGFF VVSQQGETLY TRAGSFGLDD EGYVVNNTGA
VLQGFSADGA GNIGGIQGDI RIQTSNLAPR QTTGVESLLN LDSTEPVLQT IGAEFSTAGT
AVGVTQIGRQ TAEKSTLLMD AITFPIQNLD TNPIIFDITL AGPTVGNNGT VTINLDSIDF
STSIDDLTEL QQIVSSINSQ LYSPNGGADP IDVVASVGTD GLGNPAILFE SIYEGELTDI
SISIDPASDP GNVAALGLDD TNVGTTGIPS VSNGYPLQTV DIVGPDGNIV PFSIPAGAEA
ASTASRLNEL PGISATARSE ATLSGFTNAS GNIVVSVNDI ALVVDDLADL EAEINALSTS
SLAGITATVN AAGTAITVTS AVGKDLKFAV SGGAGDAITV QGSTLSAAQT ITAGGNGDTD
AIVVGGAIDM VLEEGYSLEN AVPQLTGIFQ PFTANEFTPI VINAFDPTDQ STYNSATSMT
IYDSLGNSHV MTQYFVKQDY DATDPTSVPN HWVMYARIDD ADVGDPDTTL PPPANTQPTL
ASYDVYFNED GSLNTLLTSD MLISNWTPVD ADGNPNGALG PQNILAGGTQ TVVEPPTSSN
FVISLEGTTQ FGSEFSVNDI SQNGFSTGRL SGLNIADNGT IFARFTNGQS LRLGQVVLAD
FSNQQGLQPT GNTMWAETFE SGSPNVGTPG SAALGAVQAG ALEESNVDLS EQLVNLIIAQ
RNFQASAKTI ETADAVTQTI INLR
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