| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2184 |
|---|
| Symbol | |
|---|
| ID | 3967568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2779847 |
|---|
| End bp | 2780278 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637921274 |
|---|
| Product | flagellar protein FliJ, putative |
|---|
| Protein accession | YP_527656 |
|---|
| Protein GI | 90021829 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAAAT CAGATCGATT GCAAGTAGTG GTAGATATGG CGCGACGCGA AGAGGATGCT
GCGGCAGAAA AACTTGCTAC CATTCAAAAA CAATTAAATA ACGAAATCTC ACGTCTGCGC
GATTTAGAAG AATATTATGG TCAATATGAA CAAAGCCAGC AAATGCTGCG AACGGGTGTA
AACGCGCAAG ATTTAGCTAG AATTCGTAAT TTCCTGCAGC AGCTGGCAAT GGCTAAGCAA
GCACAAATGT TACAAATACA GCGTGTGGAA GGCGTTCAGC GGCAAGCGCG CGAAGCGTGG
CAAGCATGCC ACTTAAAACA CAAGCTAATG AAAGACATGA TTGCGAGGTA CAAAACAGAA
GAGCAGGCAG TGTTAGATAA AAACGAACAA AAAATGCTAG ATGAATGGTT TAACAGCCAA
AATGATCGTT AG
|
|---|
| Protein sequence | MAKSDRLQVV VDMARREEDA AAEKLATIQK QLNNEISRLR DLEEYYGQYE QSQQMLRTGV
NAQDLARIRN FLQQLAMAKQ AQMLQIQRVE GVQRQAREAW QACHLKHKLM KDMIARYKTE
EQAVLDKNEQ KMLDEWFNSQ NDR
|
|---|
| |