| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2183 |
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| Symbol | |
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| ID | 3967567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2778097 |
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| End bp | 2779788 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921273 |
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| Product | transcriptional regulators-like |
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| Protein accession | YP_527655 |
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| Protein GI | 90021828 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC TCCACCTTTG TGTTATTGCA CCCTATTTAC AAGGCGGCTA TATGGGAGAG
ATTATCAACC ATATACGCCG AGCTTGCGCC ACAAGAGAGT ATAGATTTAC GCTCATCCGT
ACCAATAGCC TTGGCGAATT TTCCCTTAAC CTAGGCGCTA GCGAGTTTGA TGGGGTAATT
ACCATTCGAA ATGCAGCCAG CCCAAAAATG GTAGAGTACC TGCAGAACAG AGCAATTCCT
GTTGTAGCCA TAGCACACGA TTATTTCCCG CTAGATGTTC CTATTATCAC ATCAAACAAT
GCCAAAGGCA TGGATCTAGC GTTTAATTAT TTACTAGAAC GCGGCCATAA AAAAATCACA
TTTATAGGCG ATTTATCACA ATACGATTTA CGCAAACGCT TTGAACGTTT TTGCGAACTA
CTGGATGAGA ACAAATTACA ACTTACCGAT AAAAGCCTAA TATGCGTAGA CGACACCCTC
TTTACTGGTG GCAGAGAAGC CGCTGCTCAG TTTATTAAAC ATGTAGATCA AGTTGATGCC
GTTATTTGCG GTGCTGGCAA CACAGGCATG GGCTTTGTTA AGCAACTCAA AGCACAGGGT
GTAAATTTAC CAGAAAAATT AGAAGCAATT AGTTTTGACG ACGTAGCATT TATGGAGCTA
ATCACACCCG GCATGCCTAG GATCGATCAG AACTTAGATC AAGTTGCAGC GCACGCACTA
GAGGCCCTTG AGGCTCTTAT TACGCAGACG CCCCTTACAA CTCATACGTT ACATGTTGAT
CCAACATTAA TAATCGGCAA ACCTGCTACT GCAGAACGCA ACTGGCAAAT GAGAGTTCAT
GAGCTAGATG GGCTAAATAA CCTTAACTAT GTTGATTCAT TGGTAAACAA TAGCTTCGAA
CTAACGCATA AAATTCTTAA TTCCAACCTC GATAAACTCA TGAGTTTGGC TCCGTTATTT
CAGCAACACA TGCACCTAGC ATGCTTAGCT GAACTTAAAA AAGACAAGTT CAATAGAACC
AGATTAAATA TTAAAAAGAT ATTTGAAAGC GCTTCGGCGG AAGTACTATT GCTCGAAGAT
GAAGAAAACC TAGTACCTGT TGAGTCGTAC CCCGGCAAGG CATTTAAAGA GAAGTATGGC
AACAACCACC CAACCCTTGT TCACTTCCCT ATTTTTGTTG ACGATGTGCT ATGGGGTTTT
ATTAGTGTAT TTGGCGACCC ACAGAGGGCT TCCTACCCCA CTTCGTTTAC TGGGTTTACG
GGGTATATGG ATACCATTGC ACACAGTTAT TCTTTATTAC TTTCAAAGCA ACAACACGAA
GTAGAGTCAG AAACAACCGA ACCATTAATA AGCGACACCC CCGATATATT AACCCCGTGC
TTAAAATGGG ATTTAGAAAC GGGCAGTGTA GTATGGAACG AGAAAGCGCT TGAAAAACTC
GGATTTACTA CTGACCTAGA AAAAAGCATT TACCGCAACA TGGAAGTGTT CGATCGCGTT
CACCCTGAAG ATGAGCACAA CTTGCGTAAA GAAATCACAT TAAGCTTATC GCACTTAGAC
AGGATGAATA CTTTAGTGCG CCTTAAACTC GCGCAAGGTG GCTACGCTCA GTTTAGAATT
GAAGGTGAAG TAGTTCAGAA AAAGGACGAC CGCGCAGTAA TATACCGCTG TGTAATATCG
CAAATAAACT AA
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| Protein sequence | MSALHLCVIA PYLQGGYMGE IINHIRRACA TREYRFTLIR TNSLGEFSLN LGASEFDGVI
TIRNAASPKM VEYLQNRAIP VVAIAHDYFP LDVPIITSNN AKGMDLAFNY LLERGHKKIT
FIGDLSQYDL RKRFERFCEL LDENKLQLTD KSLICVDDTL FTGGREAAAQ FIKHVDQVDA
VICGAGNTGM GFVKQLKAQG VNLPEKLEAI SFDDVAFMEL ITPGMPRIDQ NLDQVAAHAL
EALEALITQT PLTTHTLHVD PTLIIGKPAT AERNWQMRVH ELDGLNNLNY VDSLVNNSFE
LTHKILNSNL DKLMSLAPLF QQHMHLACLA ELKKDKFNRT RLNIKKIFES ASAEVLLLED
EENLVPVESY PGKAFKEKYG NNHPTLVHFP IFVDDVLWGF ISVFGDPQRA SYPTSFTGFT
GYMDTIAHSY SLLLSKQQHE VESETTEPLI SDTPDILTPC LKWDLETGSV VWNEKALEKL
GFTTDLEKSI YRNMEVFDRV HPEDEHNLRK EITLSLSHLD RMNTLVRLKL AQGGYAQFRI
EGEVVQKKDD RAVIYRCVIS QIN
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