Gene Sde_2181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2181 
Symbol 
ID3967565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2774621 
End bp2775967 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content43% 
IMG OID637921271 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_527653 
Protein GI90021826 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTG CCTCCCAACC AGATAATCAG CACATCGCCG TATTTTCACC CTACCTGCAA 
GGTTTTTACC TTGGCGAAAT TGTCGATCAA ATTCGACAGC TATGCTCAAT CAACCACTAC
AAGTTCACAG CGATTCGCAC AGATAGCCTA GCCACTTTTG ATATCCCCCT TGGAGTATCA
CATTTTACCG GCGTAATAAT ACTCAAAAAT GCTATATCAC CCGCCTTAGC AGACCGGATT
CTTACAATGG GTATTCCTGT TGTATCCATA GCCTATGACT ACTACCCGCT GGAAATTCCA
GTGGTAGGGT GTGACAACGA ACAGGCTGTA GCCCTAGCCT ATAACTATTT AAAAGAACTT
GGTCACAATC AAATTGCTTA TGTTGGTGAT TTTAGTCAAT ACGATTTGCG TAAACGCTTT
GAGTATTTTG GTAAATTATG CGATCAAGAC AAGGACAGCA ATAGCGACTT AGACACTTTT
TACCCAGTAG ATAATTCCCT ATACCGCGGA GGGCTGAATG CAGCCAAAGC ATTCCTCAAA
CGCGGCGACA CCTCCACGGC GGTTATTTGT GGGGCTGGGC TTACCGCTAT AGGGTTTTAT
GAAAAGATAA ACAAGAGCAA CCGCAAAATA GATGTGGTTG GTTTTGACGC CACATCTATC
ACACCTATTT ACGCGCCAAA CATCATAGCC GTTGATCAAA ACTTGCATTT AATTGCGCAT
AAAGCACTTG CTGTAATAAA GAATATTCAG CAACAGGAAG AGGTTCAGCG TGAAGAGCAA
GTACCGGCAC GCTTGATACT GCCCAACGAG AATAAAGACG CCACATTAAA CGACTACATG
GTAACGTGCA CAGAAAAAAA CATCTTCGCG AACCCCAATT ACGCTAAAGC TTTAATAACC
AACAACTACG AATGGACTAA GCAGATAATT GACAGCAACC TAGATGAATT AATGAGTATT
TACCCCGTAT TTAGAGATTT TATGCAAGCT GGGCTGCTGT GTAGAACAAA ACTAGGAGCC
AATAACGAAA CTCAACTTGT AGCCACACGC GCTTATACAG AATCCGAAAC AATTAATCTA
GGAAGCATGG ACCCGCCTTT AAGCTTCAGT GCAGACACTT ACCCTGTTGA AAAGCACAAC
TCCCATATAT TTATAGAGGG CATGATAAAC ACCCACTTTC CTATAACGGT GGGCGGTAAA
AACTGGGGCG TACTTAGCTT TTCTGGACCT GCTAATTTAG CGGAGACAAA CAGTAGCTAC
ATGGGCTTTA CAAGCTATGT TGATACTGTC ACACAAAATT TAGCCCACGT GCTTTTGGCG
AAAACGGTAC TAAAAACGAG CGAATGA
 
Protein sequence
MTSASQPDNQ HIAVFSPYLQ GFYLGEIVDQ IRQLCSINHY KFTAIRTDSL ATFDIPLGVS 
HFTGVIILKN AISPALADRI LTMGIPVVSI AYDYYPLEIP VVGCDNEQAV ALAYNYLKEL
GHNQIAYVGD FSQYDLRKRF EYFGKLCDQD KDSNSDLDTF YPVDNSLYRG GLNAAKAFLK
RGDTSTAVIC GAGLTAIGFY EKINKSNRKI DVVGFDATSI TPIYAPNIIA VDQNLHLIAH
KALAVIKNIQ QQEEVQREEQ VPARLILPNE NKDATLNDYM VTCTEKNIFA NPNYAKALIT
NNYEWTKQII DSNLDELMSI YPVFRDFMQA GLLCRTKLGA NNETQLVATR AYTESETINL
GSMDPPLSFS ADTYPVEKHN SHIFIEGMIN THFPITVGGK NWGVLSFSGP ANLAETNSSY
MGFTSYVDTV TQNLAHVLLA KTVLKTSE