| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2168 |
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| Symbol | |
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| ID | 3967552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2763004 |
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| End bp | 2764203 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637921258 |
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| Product | hypothetical protein |
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| Protein accession | YP_527640 |
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| Protein GI | 90021813 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTT ATCAATTAGT TAGCACACTA CTAGCTTGTG GAATAGGCTT TTTAATATCC
ATTAATAGCT ATAGCGAAAA CAGCGTATTA ACCCAACCTA TCGCAGAAGC CGAGCAATCG
CAAAACACCG TTAAAAATTC CACCTACCTA AATGAAATAA ACGACGAAGA TATAATGGCA
ATTAGCGATG AGCTAAAGGC TATTTTAGAT TTGAACGTAC GCCCTATTAA ACGCATTGAA
GCAAAAACCA TTCGCTTGCA TGAAATACTG TTCGGCAGCA ACTATTACAA TATTCGCTAT
GCATTTGACG ATACTCGCAT AGCCAACGAC GTATTTGAAG CAAGAACCGG TAACTGCATT
TCATTGGCAG CGCTATATGT CGCCTCTGCG AGGTATGTAG GTTTAGATGC GTACTTTCAG
TCGGTAGACA TAGAGCAAAC CTGGGAAAAG CGCGACGGCC ACTACGTAGT ACCGGGCCAT
GTCAACGCAC GTATTGCTCA CCCAAGCAAA ACCATTGTGG TTGAATTTAT TTCCACTTAT
TTCTTAGAAA CACTCTCACA AAAAAAATCA CGCAAAATTT CAGATAAGCG CGTATTTGCC
GAGTTTTATA ATAATCTGGG AATGGAAGCA TTTGACGCGG GCCACTTAGA ACGTGCCGAA
ACACTGCTCG CCAAGGCAGT AAGCAAAGAT AAAAAGCTAG ATTTTGCATG GTCTAACCTT
GGCGTAATAT ACAAACACCA AGGCAAATTA GACCAGGCAG AAAAGGCGTA TTTAAAAGCG
CAAAAACTAA ATAAACGCAA CCCTACTTTT GCCAACAACC TATATGTGTT GTATCGCGAA
ACTGACCAAC ACAAAAAAGC CGAAGCGCTA GCCAAACGCG TAATTAAGTA CAATCGTAAA
AACCCGTATT ATCTCGCCCA ATTAGCGCAA ACCGATATGG AAACCAAACA TTACGACAGC
GCTGTAGAAC ACCCTTTAAA CGCTATAAAA ATAAAACCAG AAGAAGAGCA GTTTTATGTT
GAACTCTCTA AAAGCTATTA CTACAAAGGC GATTTAGAAG GAACAAAAAA AGCATTAATT
GGTGCAGCAA CTGCAGCCAA CATGCCTGAG AATCAAGCGC GCTACAACCA TAAAGTAAAA
CTTATAGAGC AGTACGTTAA TGAAGCCCAA CTTAATACCT CTAGGCAAGC ACAGTTTTGA
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| Protein sequence | MRIYQLVSTL LACGIGFLIS INSYSENSVL TQPIAEAEQS QNTVKNSTYL NEINDEDIMA
ISDELKAILD LNVRPIKRIE AKTIRLHEIL FGSNYYNIRY AFDDTRIAND VFEARTGNCI
SLAALYVASA RYVGLDAYFQ SVDIEQTWEK RDGHYVVPGH VNARIAHPSK TIVVEFISTY
FLETLSQKKS RKISDKRVFA EFYNNLGMEA FDAGHLERAE TLLAKAVSKD KKLDFAWSNL
GVIYKHQGKL DQAEKAYLKA QKLNKRNPTF ANNLYVLYRE TDQHKKAEAL AKRVIKYNRK
NPYYLAQLAQ TDMETKHYDS AVEHPLNAIK IKPEEEQFYV ELSKSYYYKG DLEGTKKALI
GAATAANMPE NQARYNHKVK LIEQYVNEAQ LNTSRQAQF
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