| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2147 |
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| Symbol | |
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| ID | 3967531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2738462 |
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| End bp | 2739583 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921237 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_527619 |
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| Protein GI | 90021792 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.707843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGATA AATCCGAGCC AATTAGTGCA GAAGAAGCGG CGCTTCTTGG TGAATTGCGC
GTAAAAATAG ACGATATAGA TCAGCAGATT GGCGACTTAA TATGTGCTCG CGCAAATTGT
GCGGTAGAAG TTGCCCATGT AAAAAAACGC TTTTCTAATA TCACCGAGCC AAAGTTTTAT
CGCCCAGAGC GCGAAGCACA GGTATTGCGC AATGCTATGG CGCGTAACAA GGGTCCGTTG
TCTAACGAAG AGTTTGCCCG TTTATTTCGC GAAATAATGT CTGCTTGCTT GGCTTTAGAA
GCACCAGTAA AAGTGGCTTA CTTGGGGCCA GAAGGCACCT ATACCCAGCA AGCCGCACTT
AAGCATTTCG GTCATTCCGC TCAAGCTGTT TCTTTGCCCG CTATTGATGA AGTTTTCCGC
GAAGTAGCAT CTGGTGCTGC GCACTATGGT GTAGTGCCGG TAGAAAACTC CACCGAAGGC
GTGGTTACGC ACACCTTAGA TAACTTTTTA GGCAGTAGCG TAAAAATTTG TGGTGAAGTT
GTACTGCGTA TTCATCACCA CCTGTTAGTT TCTGATGTAA CACACGTACA AAATATTTCG
CGCATTTATT CTCATGCGCA GTCTTTGGCG CAATGCAGAA AATGGTTAGA TGCACATTAC
CCTCGTGCAG AGCGTATAGC GGTAAGCAGT AATGCAGAAG CAGCACGCCG AATAAAAGGC
GAGTGGAATT CAGCTGCCAT TGCAGGCGCT ATGGCGGCAG ATTTATACGG CCTTACTAGC
CACGCACAAA ATATTGAAGA CCAGCCAGAT AACTCCACGC GCTTTTTAAT TATTGGTGCA
GAAAGCGTAG GTGCAAGCGG CGAAGATAAA ACTTCTATTG TTGTGTCTAT GAAAAACGAG
CCGGGTGCGT TGCACAATTT GCTAGAGCCA TTCCATCAGC ACGGCATAGA TTTAACCCGC
GTAGAAACTC GTCCATCGCC AACCGGTGCG TGGAACTACG TGTTTTTTAT AGATTTTGCC
GGCCATGCCA GCGAGCCAGT TGCTAAAAAA GTGCTAGAGG AAGTGGGGCG CAGAGCCTCA
GATCTGAAAA TATTAGGCTC ATACCCTAAA GGCGTACTTT GA
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| Protein sequence | MSDKSEPISA EEAALLGELR VKIDDIDQQI GDLICARANC AVEVAHVKKR FSNITEPKFY
RPEREAQVLR NAMARNKGPL SNEEFARLFR EIMSACLALE APVKVAYLGP EGTYTQQAAL
KHFGHSAQAV SLPAIDEVFR EVASGAAHYG VVPVENSTEG VVTHTLDNFL GSSVKICGEV
VLRIHHHLLV SDVTHVQNIS RIYSHAQSLA QCRKWLDAHY PRAERIAVSS NAEAARRIKG
EWNSAAIAGA MAADLYGLTS HAQNIEDQPD NSTRFLIIGA ESVGASGEDK TSIVVSMKNE
PGALHNLLEP FHQHGIDLTR VETRPSPTGA WNYVFFIDFA GHASEPVAKK VLEEVGRRAS
DLKILGSYPK GVL
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