| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2087 |
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| Symbol | |
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| ID | 3967471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2671104 |
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| End bp | 2672003 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921177 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_527559 |
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| Protein GI | 90021732 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.589785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.993199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACCA GCATGGATAC AGACGGATTA AAAGCTTTTT TAGCAGTCGC GGAACACCAC
TCGTTTTCGG TGGCAGCCCA ACACCTGTTT ATTACTCAGC CAGCCGTTAG CAAGCGTATA
GCCGCACTTG AGCAAGAGCT AAACCATATA TTGTTCGACA GGCTTGGGCG AGATGTAGCC
CTAACAGAGG CCGGCCAGGC ACTGTTACCG CGAGCGCAGG CGATTTTGAA TAGCATGCAC
GAAGCCCAGC GCACTATTCG TGAGTTTTCT GGCGAAATTG TGGGCACCCT GCGAGTAGCT
ACCAGTCATC ATATTGGCTT GCACCACCTT CCCCCCATTT TGCGCGAGTT TGCGGCTAAC
CATAAACAAG TTAACTTACA ATTTGACTTC CTAGACTCTG AGCAGGCACA CGAAAAGGTT
CTGCGCGGCG ATTGCGACTT GGCTGTAGTT ACACTAGCCC CCACACTAGA AGAAAACCTA
GAAGCATCAG TGTTGTGGCC CGACCCATTG TGCTTTATTG TTGGCGCCAA TCACCCACTG
GCCACCTCTA AAAACATTTC GCTAGAAGAG CTAAGCCGAA CACCAGCCAT TCTGCCAGAT
TTAAATACTT ACACCGGCCG CCTAGTAAAA CACTTTTTCG ACACCCAAGG CTTAGCGTTA
AATTTAAACA TGGCAACCAA TTACCTAGAA ACTATTAAAA TGATGGTCAC AGTAGGTTTA
GGCTGGAGCG TATTACCTAA AACGATGGTG GACAGTAGTT TAAAAATTTT ACCGATTAAA
AACATCCAGC TAGAAAGACA GCTAGGCGTG GTCATTCATA AAAAGCGCAC TCTCGGCAAT
GCCGCGCGCG CCTTTTTTGA AGTTTTAAGC GCCAACTCTC AAATAAAGCA GATCAACTAA
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| Protein sequence | MITSMDTDGL KAFLAVAEHH SFSVAAQHLF ITQPAVSKRI AALEQELNHI LFDRLGRDVA
LTEAGQALLP RAQAILNSMH EAQRTIREFS GEIVGTLRVA TSHHIGLHHL PPILREFAAN
HKQVNLQFDF LDSEQAHEKV LRGDCDLAVV TLAPTLEENL EASVLWPDPL CFIVGANHPL
ATSKNISLEE LSRTPAILPD LNTYTGRLVK HFFDTQGLAL NLNMATNYLE TIKMMVTVGL
GWSVLPKTMV DSSLKILPIK NIQLERQLGV VIHKKRTLGN AARAFFEVLS ANSQIKQIN
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