Gene Sde_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2035 
Symbol 
ID3967298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2563309 
End bp2563734 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content40% 
IMG OID637921123 
Producthypothetical protein 
Protein accessionYP_527507 
Protein GI90021680 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.984439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGTTG AGCTTTGCTT TCATATATCC CTTTTTTGCC CTGTAAACCT AATTTTATTT 
ATCCCCAGTG TTGCGCTTTA TATAGCAAGC TTAAGCATTG CGCTTGTTGG TGCTGGTGTA
ATTCTTGCCG GCGCATATCT GTTTAAAAAA CACCAAACTA CCGTAAACCC TATGCACCCA
GAGCGTAGCA GTACTTTGGT GCAAACTGGT GTTTATAGGT TTACGCGCAA CCCTATGTAC
TTAGGCATGC TGCTTATAAT TCTTTCTTAC TTGCTGCTAA GGTTTAGTTT TGTAGGGTTG
GTATTGCCAA TTGTGTTTGT GTTTTTAATG ACACATATGC AAATAAAACC AGAAGAAGAA
ATGCTGACCA AATTGTTTGG TGATGCGTAC TTGCAGTATT TGCAGCGTGT TAGGCCTTGG
CTGTAA
 
Protein sequence
MLVELCFHIS LFCPVNLILF IPSVALYIAS LSIALVGAGV ILAGAYLFKK HQTTVNPMHP 
ERSSTLVQTG VYRFTRNPMY LGMLLIILSY LLLRFSFVGL VLPIVFVFLM THMQIKPEEE
MLTKLFGDAY LQYLQRVRPW L