| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2025 |
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| Symbol | |
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| ID | 3967288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2550106 |
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| End bp | 2551536 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921113 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_527497 |
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| Protein GI | 90021670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0465595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATA AAGGTTTGTC CCATTGGGTT ACAAAGTTAC GCACGCAAAA CACCCCAGTT
TTGAACAATG TTATTGTTGA ATTAAACGCA ATAACAGGTG ACGAAGAAGC CGATGTTAAC
CAAATGGCCG AAGTGATTTT ACGCGACGCA AACCTAACCT CGCATGTGTT GCGGGTAGCT
AACAGTGTGC AGTACAACTA TGGCAAGGCG CGTATAAATA CAGTAAGCCG AGCAGTGGTT
TTAATTGGTT TAAAAGGAAT GCGGGCCATT TGTATCTCCT TATTGTTAAT AGATTCGTTG
CTTACGGGCA AGTCTAAGCA ACGCGTGCTG GATTTAATGG CACAAGGCTT TCATGCTGCG
ACCCAAGCGC GCAACATTGT TTTAAAATTA GACAGCGACG CAGCTGAAGA GGCTTTTATT
GCTGGCTTAC TTTATAACCT TGGTGAGATG GCGTTTTGGG CCGCGCAGGA GATGAACCCC
GAAAACGAAG CCCTCATAAA TGATGATATG CGCGTGCGCC GTCAGGCGAT GGAGACACAG
CTTGGCACCT CCTTTAAAGC AGTAACCAAA GAATTGGCTC GTCACTGGAA GCTCGGCGAG
ACGCTCGAGC AGGTGTTATC ACCTTCAGAG CAGTCATCTG ATGTTGTAAA AGCTGTGGTA
ACCGGTGAGC GCATTAGTCG TGCAGCGCTG TTTGGCTGGG ATAGCCCGCA GGTTAAAAAG
GTGGTTGCGG AAGTGTCGGA GCTGCTTGGT ATTTCTGATG ATCAATCTGA AACAATGATC
AAAAATAGTG CAGATCAAGC GGCGGAAGTA GCATTGGACT TTGGTGTTAA CGAAGCATGC
CCACTTATTC CTAGCAGTCG CTCGAAGGTT CCCAAAAAAT CCAAACCCGC TAGCAAGATT
CTTAAGGGCG ATGCCATGCT GCAGCTTAAC ATTTTGCGGG ATTTATCTAA CGCAACCTAT
GAGCGCATGG ATGTAAACAC TATCTTTCAG ATGGTTGTGG AGGGTATGCA CCGGGGCATT
GGGTTAGAAC GAGTTGTTAT AGCCTTTATT AAAAAGCGCA AATTACAGGC CAAATACATG
CTGGGCGAGG GCACAGAGCA CTGGCGTTCA AGCTTTATGT TTGATGTAGG GCCGTATAGC
GAAAGCATAT TTACCCACGC TATGGAAAAA GGCGGCAACC ATTGGTTTAC GCAAGATGCC
ATTGCAAGCC AATCGAACCT TTACCCCAAC GATTTGATTA CCATTGTGGG GCGTTTTCCT
TCTTTTGTAT CTACTTTGCA AATAGATGAT AGAAAAGTGG CGTTATTCTA TGCCGATAGA
TGGAATTTTG GTGGCAGGCT AAGTGAAGAT CAGTTTGAAA GTTTTAAGCA CTTTTCAAAT
CAGGCTCAAG CGAGCTTGAA CCTGTTATCG TCGAAGGGGC GGAAGCAGTA A
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| Protein sequence | MANKGLSHWV TKLRTQNTPV LNNVIVELNA ITGDEEADVN QMAEVILRDA NLTSHVLRVA
NSVQYNYGKA RINTVSRAVV LIGLKGMRAI CISLLLIDSL LTGKSKQRVL DLMAQGFHAA
TQARNIVLKL DSDAAEEAFI AGLLYNLGEM AFWAAQEMNP ENEALINDDM RVRRQAMETQ
LGTSFKAVTK ELARHWKLGE TLEQVLSPSE QSSDVVKAVV TGERISRAAL FGWDSPQVKK
VVAEVSELLG ISDDQSETMI KNSADQAAEV ALDFGVNEAC PLIPSSRSKV PKKSKPASKI
LKGDAMLQLN ILRDLSNATY ERMDVNTIFQ MVVEGMHRGI GLERVVIAFI KKRKLQAKYM
LGEGTEHWRS SFMFDVGPYS ESIFTHAMEK GGNHWFTQDA IASQSNLYPN DLITIVGRFP
SFVSTLQIDD RKVALFYADR WNFGGRLSED QFESFKHFSN QAQASLNLLS SKGRKQ
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