| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2020 |
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| Symbol | nhaB |
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| ID | 3967283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2544050 |
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| End bp | 2545549 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921108 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_527492 |
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| Protein GI | 90021665 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.974157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCAGT CCATGACTAA CGCGTTTTGG CACAATTTTC TGGGCCACAC CCCAAATTGG
TATAAGAAAA CAATTTTAGG TTTCTTGGTT ATCAATATTG TTCTCTCCCA AGTTAGTCCT
TTTTTGGCTG GTTGGGCGCT AATTATTGAG TTCATTTTTA CTCTTGCTAT GGCTCTCAAG
TGCTACCCTT TGCAGCCGGG CGGCTTATTG GCCATTCAAG CTGTGCTACT TGGGCTAACC
AGCGCAGACT CGGTATACCA TGAAGTACTC GCCAACTTTA AAGTAATTCT GCTACTTATG
TTTATGGTGG CAGGCATCTA CTTTATGAAG GACATGCTTC TTTTCGTGTT TACCAAGATC
TTGCTTGGTA TTCGCTCGAA ACTGCTTCTC TCTTTATTGT TCTCATTTGT TGCAGCAGTG
CTTTCTGCCT TTTTAGATGC GCTAACAGTA ACTGCCGTAC TCATCGCTGT GGCTGTAGGT
TTTTACGCGG TTTACCATCG CTTTGCCTCA GGTAGTGGGC ACGGTAACGA CCACGACCAC
TCCGCAGATG ATAATGTGCA CGATTTGCAC CGCGAAGATT TAGATACTTT CCGCAGCTTT
TTGCGCAGCC TTATTATGCA CGGTGCAGTA GGTACCGCCC TAGGTGGCGT TGCTACCTTA
GTTGGCGAGC CTCAAAACTT GCTTATTGCA GAAATTGCTG GCTGGAACTT CATTGAGTTC
TACTTGGTTA TGGCACCTAT TTCTGTGCCT GCTTTAATTG GTGGTTTGCT CACCTGCGCA
ATACTAGAAA AGACAGGTAT CTGCGGCTAC GGAGCCAAAT TACCCGATAG CGTGCGCCAA
ATATTGGTCG ATTTTGATAA AAAGGAAACG GCAAAGCGCG GGTTTGGCGA TAAGGCGCAA
TTACTTGTAC AAGCGGTTGT CGCAGTAGTG CTTGTATTTG CATTAGCCTT GCACCTAGCG
GAAGTTGGCC TTATTGGTTT GCTTATTATT GTTCTGCTAA CCGCCTTTAA CGGCATTACC
GATGAACACC GCATTGGTCA CGCTTTTGAA GAAGCGCTGC CCTTTACCGC GCTGCTAGTG
GTGTTTTTCG CAGTTGTGGC TGTTATCCAC GACCAGCATT TGTTTACACC GGTTATTGAT
TACGTTTTAG CCATGGAACA AGGTGCCCAG GCTCCTATGT TCTTTGTGGC TAACGGCGTG
TTATCTATGA TTAGTGATAA TGTGTTTGTT GCTACCGTGT ACATTAACGA AGTAAAAGCG
GCATTCGATG CGGGTACTAT TTCTCGTGAG CATTTTGATG TACTTGCTGT AGCAATTAAT
GCCGGCACCA ACCTACCTAG CGTGGCGACA CCAAACGGCC AAGCAGCATT TTTATTCCTG
CTCACTTCTG CTCTTGCCCC GCTTATTCGC CTTTCGTACG GCAAAATGGT AATAATGGCG
CTGCCCTACA CAATCGTTCT TGGTGCGGTT GGCCTTGGGT CTGTAATACT CTTCTACTAA
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| Protein sequence | MPQSMTNAFW HNFLGHTPNW YKKTILGFLV INIVLSQVSP FLAGWALIIE FIFTLAMALK
CYPLQPGGLL AIQAVLLGLT SADSVYHEVL ANFKVILLLM FMVAGIYFMK DMLLFVFTKI
LLGIRSKLLL SLLFSFVAAV LSAFLDALTV TAVLIAVAVG FYAVYHRFAS GSGHGNDHDH
SADDNVHDLH REDLDTFRSF LRSLIMHGAV GTALGGVATL VGEPQNLLIA EIAGWNFIEF
YLVMAPISVP ALIGGLLTCA ILEKTGICGY GAKLPDSVRQ ILVDFDKKET AKRGFGDKAQ
LLVQAVVAVV LVFALALHLA EVGLIGLLII VLLTAFNGIT DEHRIGHAFE EALPFTALLV
VFFAVVAVIH DQHLFTPVID YVLAMEQGAQ APMFFVANGV LSMISDNVFV ATVYINEVKA
AFDAGTISRE HFDVLAVAIN AGTNLPSVAT PNGQAAFLFL LTSALAPLIR LSYGKMVIMA
LPYTIVLGAV GLGSVILFY
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