| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2009 |
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| Symbol | |
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| ID | 3967252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2529689 |
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| End bp | 2530300 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921097 |
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| Product | hypothetical protein |
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| Protein accession | YP_527481 |
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| Protein GI | 90021654 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
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| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAAA CAATGTCCGA TCAAGCACAA CTGAACGTTA ATATTACTGA ATCCGCGCAA
ACTTACCTTA AGGGGCTGTT AGAAAGTCAA AACGAAGAAG GTACCGGTAT TAGAATGTTT
GTTTCCAAGC CTGGCACGCC GCAAGCTGAA ACCTGCATTG CGTATTGTCG ACCGGGTGAA
GAAAAAGAGG GCGATATTAT TGTTGAGCTA AATGGCTTTA AAGCCTACTT TGAAGGCCGC
AGCGTACCGT TTTTAGATGA AGCAAAAGTC GATTATGCAG CCGATAAGAT GGGCGGGCAG
CTTACTATTC GTGCCCCCAA CTCTAAAATG CCTAAAATTA CCGAGGACAG CACGATCGAA
GATCGTATTA ACTATGTGCT GTACAACGAG GTAAACCCAG GCCTTGCAGC TCATGGTGGC
AATGTAAGCC TAGAAGCTAT TACCGATGAT ATGCATATTG TGTTGAAATT CGGTGGCGGT
TGCCAAGGTT GTAGTGCTGT TGATATGACC TTGAAGCAAG GCGTAGAAAA AACACTGATG
GAGCGGGTGC CAGAGATAAA AGGCGTGCGC GATGCGACAG ACCATACGGA TAAATCACAC
GCTTATTATT AA
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| Protein sequence | MSQTMSDQAQ LNVNITESAQ TYLKGLLESQ NEEGTGIRMF VSKPGTPQAE TCIAYCRPGE
EKEGDIIVEL NGFKAYFEGR SVPFLDEAKV DYAADKMGGQ LTIRAPNSKM PKITEDSTIE
DRINYVLYNE VNPGLAAHGG NVSLEAITDD MHIVLKFGGG CQGCSAVDMT LKQGVEKTLM
ERVPEIKGVR DATDHTDKSH AYY
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