| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1988 |
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| Symbol | |
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| ID | 3967231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2497816 |
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| End bp | 2500428 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921076 |
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| Product | DNA polymerase 3, epsilon subunit |
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| Protein accession | YP_527460 |
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| Protein GI | 90021633 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGGAA TATGGAGGCG TACCATTAAC AGTAAATTAA CTGAACAAGC ACATAACAAT
ACGAGACCAC AAAGCACCGC AGCCAAAAAT ATCGTATTGA TAACGGGGGC TACAGGTAAT
ATTGGCCGCG CACTAAGCGA ATTCTTAGCG GCAGATTTTA GGGTGGTTGG TTTAGATCGT
TCTGAATACG CAGACATAAC CTGTGACATT ACATCCCCTA AATCTATGGA TAATGCAATC
CTTACGGTTA AGGAAAGGTT TGGCGAACGC GTAGCAGCAG TAATTCATCT GGCCGCGTAT
TTTGATTTTA CCGGCGAAAA GTCGCCGCTT TACGATGAAG TAAATGTAAA GGGCACAAAA
AACCTACTTG ATGCATTAAC TCAAATAAAT GTAGAGCATT TTATTTACGC CAGTACCATG
CTCGTTCATA AACCGGGTAA ACCCGGAGAG CTTATAGCAG AGCAATCGCC CTTGGGGCCA
AAGTGGGCTT ACCCAGAATC GAAAGCGAAT GCAGAAAATG TAATTATAGA CCACACCAGC
AAAACCCCTT TTACCATACT TAGGCTAGCG GGCTTATACG ACGACGAAGT GGCTGTGCCC
ACGTTAGCAC ACCAAATATC GCGTATATAT GAGCGCAACC CCAAAAGCGT ATTGCATTCA
GGTGATAGCC AAGCCGGCCA AGCATTTATT CACAGAGAAG ATTTGCTCGA CCTCTTTAAA
GCAGTAATAA CAAAGCGTAA AGAACTTGAT AGCCAGAATA TATTTTTAGC TGGCGAAGCC
TCTGTTATTA GTTATTGTGA ACTACAACAT CAAATAGGTA AGCAGATTCA CGGCGAAAGC
GATTGGGCGA CCTTTTCTGT GCCAGAACCT TTAGCAAAAG TAGGGGCGTG GGTAGAGGAC
AGGTCTGAGC CGGTAATACC AGATGATCTA GATGAGGGTG AACGGCCCTT TATTAAGCCA
TTTATGATTG ATATGGCGTC TGATCACTAT GAGCTAAATA TAGAAAAAAT AGAGCACACA
CTGGGGTGGA CCCCCAAGCA TCGTATACAA ACTAGTTTGC CAAAACTAAT TCATAATCTT
AAAGCCAACC CTATTCAATG GTACGAGAAC AACGGCATTA AAGTTCCGGC ATGGTTTCGC
GCGGCTAAAG AAAAAAATAT GAATCCTGAA GAGTTAAGAG AGCAGTATGA AGTAAAGTAT
TTAGAAGCGC ATAAAAATAG TATTTGGGCC CCCTTCGTAA ACATGGGGTT GGGAGCCTGG
CTATTAAGCT CACCATTTAC ACTAGGCTAT AACGCTTCAG CAATGTGCAT AAGCGATATT
GTTTCAGGTG TGTTGGTTTG TATTTTTGCG TGCATGTCCC TCTCTGCTAA GCCCTTATAC
CAATTATCTC GCTGGGGGTT AGGCGTGGTA GCTATGTGGC TTATGTTTGC CCCTTTAATA
TTTTGGACTC CAAGCGCAGC TGCTTATTTA AACAACACCA TTATAGGCGG GTTAGTATTC
GGCTTTGCAC TTTTAGTTAG ACCATTCCCG CGTTTGGTAT CGCCGGTAGC GAGTGAAACA
GGGCCTTCAA TCCCACCTGG CTGGGAGTTT TCGCCATCAG ATTGGTTTCA GCGGCTGCCA
ATAATTTTAT TGGCATTTGT AGGCTTTTTT ATATCTAGAT ATTTGACTGC GTATCAGTTA
GAGCATATAG ATAGCGTGTG GGAGCCATTT TTTGGTGGTG CTATAGATAA TGCCAAAAAC
GGTACAGAAG AGATAATTAC ATCTAGCGTG TCCAAAGCTT GGCCGGTACC AGATGCCGGC
TTAGGAGCAC TAACCTATTT GTTAGAAATA CTTACCGGTG TAATTGGGTC TCGCAACCGC
TGGCGAACTA TGCCGTGGCT AGTATTATTT TTTGGTTTTA TGATTATTCC ACTAGGTGCA
ATTTCAATCA CCTTTATTAT CATTCAGCCT ATTGTGCTAG ATACTTGGTG CACCCTCTGT
CTAATTGCCG CCGTCGCAAT GCTTATTCAA ATCCCCTATA GTTTTGACGA AATAGTTGCA
ACAATTCAGT TTCTAAAAAG GCGAGCGCAA GCTGGTCAAC CTTGGATGCT AATCCTATTT
ACTGGCGATA CCGATGAACC CAATAAAATA GAAGAAGAAA TGGCAAATGC CTCGCGCGAG
AAACAGAGTA GCAACGCTAA GCACGGTTTG CTACCCGAGA GCAATGGTAA TCAAGCCGAT
AACTTTGCTC AGTCACCTGT AAAAATATTC AAAGAGTGTG CGTTAGGCGG TGTTACCTTG
CCATGGAACC TTGCGGTCTG CGCAATATTG GGTGTTTGGC TAATGTTTAC ACGCATTACA
TTAAATACAA CAGGCGCAAT GGCGAATGCG GATCATCTAA TAGGTGCATT AATACTCACA
ATAACCATAA CCGCGTGCGC AGAAGTAATG CGGCCAATAC GATTCGTTAA TATTTTTCTC
GGCATGGCGC TATTGATTAC GCCTTTTGTA TTATCCGCGG GTATTATTTC TATATTGGCA
AGTGGGGTAG CGGGCTTAGC AATAATAGCG TGTAGCCTAC CTAAAGGGAG TATTGGCAAT
AAGTATGGTA GTTGGAGCAG CTATATAGTT TAG
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| Protein sequence | MNGIWRRTIN SKLTEQAHNN TRPQSTAAKN IVLITGATGN IGRALSEFLA ADFRVVGLDR
SEYADITCDI TSPKSMDNAI LTVKERFGER VAAVIHLAAY FDFTGEKSPL YDEVNVKGTK
NLLDALTQIN VEHFIYASTM LVHKPGKPGE LIAEQSPLGP KWAYPESKAN AENVIIDHTS
KTPFTILRLA GLYDDEVAVP TLAHQISRIY ERNPKSVLHS GDSQAGQAFI HREDLLDLFK
AVITKRKELD SQNIFLAGEA SVISYCELQH QIGKQIHGES DWATFSVPEP LAKVGAWVED
RSEPVIPDDL DEGERPFIKP FMIDMASDHY ELNIEKIEHT LGWTPKHRIQ TSLPKLIHNL
KANPIQWYEN NGIKVPAWFR AAKEKNMNPE ELREQYEVKY LEAHKNSIWA PFVNMGLGAW
LLSSPFTLGY NASAMCISDI VSGVLVCIFA CMSLSAKPLY QLSRWGLGVV AMWLMFAPLI
FWTPSAAAYL NNTIIGGLVF GFALLVRPFP RLVSPVASET GPSIPPGWEF SPSDWFQRLP
IILLAFVGFF ISRYLTAYQL EHIDSVWEPF FGGAIDNAKN GTEEIITSSV SKAWPVPDAG
LGALTYLLEI LTGVIGSRNR WRTMPWLVLF FGFMIIPLGA ISITFIIIQP IVLDTWCTLC
LIAAVAMLIQ IPYSFDEIVA TIQFLKRRAQ AGQPWMLILF TGDTDEPNKI EEEMANASRE
KQSSNAKHGL LPESNGNQAD NFAQSPVKIF KECALGGVTL PWNLAVCAIL GVWLMFTRIT
LNTTGAMANA DHLIGALILT ITITACAEVM RPIRFVNIFL GMALLITPFV LSAGIISILA
SGVAGLAIIA CSLPKGSIGN KYGSWSSYIV
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