| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1971 |
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| Symbol | |
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| ID | 3967136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2480580 |
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| End bp | 2481824 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921059 |
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| Product | putative ABC transport system permease protein |
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| Protein accession | YP_527443 |
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| Protein GI | 90021616 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATTA ATTTTGCTTG GCAAAGTCTT CTAGCAAGAA AGGTTACAGT GGGACTAACC
GTGTTATCCG TAACCATAAG CTTGCTAGTT ATGCTTGCGA TACAGCATAT AAAACAAGAG
GCAAAAACAA GTTTCACCAA AACAATTTCA GGTGTTGATT TAATTATTGG TGCTCGCACA
GGGCAGCTTA ATCTGCTTAT GTATTCCATT TTTAATGTTG GCAATGCAAC CAACAATATT
AGCTGGAAAA GTTATGAGGA GCTTTCACAA CAAAAAGAAG TCGCCTGGGC AATACCTATT
TCACTAGGTG ATTCTCATAA AGGTTTTCGC GTGCTAGGCA CAACAGAAGC TTACTTCGAG
CACTTTAAGT ATGCTAACAA GCGCACCATA AGCTTCAACC AAGGCCGTTC GTTTTTGGGC
ACATTTGAAG CAGTAATAGG TAACCACATA GCCCAAAAAC TTAATTACAA AGTAGGGGAT
GCCATTACAC TTAGCCACGG TATAAGTGCA AAAAGTTTTA GTGAACACAA GCACAACCCT
TTTACTGTTG TAGGCATTTT AGCCCCAACA GGTACACCCA TAGACCAAAC CGTACATGTG
CGCCTAGATG GCATAGAAGC CATTCATAAG GGGTGGCAAA GTGGTGTCGA TTTATCTCAG
TATGGCAACT ATGTAAACCA CAGCAACCAC ACCAAAACCC AAGATCTAAC ACCTACAAGC
ATTACGGCAT TTATGGTGGG CCTTAACTCG AAGCTATCTA CATTTACATT TCAACGAAAG
GTAAACACCT ATAAAAACGA ACCCATGCTA GCAATATTAC CCGGCATTGC ATTAAGTGAG
CTTTGGCGCA TGATGGGCAC GGTAGAAAAC ATTCTAGCGA TAATTTCTTG GCTGGTATTG
TTCGCCGCGT TAATTGGCCT ATGCACAATT ATGCTTGCCG CCATACGAGA ACGGCGCCAT
GAATTCTCGG TACTTAGAGG TATTGGGGCT AGCCCTTGGT TTATATTTAG CTTAATTCAG
CTTGAGTCTT TACTCATTGT GCTAATAAGT ATTGGCGTTG CAGTACTTAG CCTGTGGTTA
GGGCTAGAGT TAACCCAAGA CATGCTAATA AGCAAATACG GGCTAAATAT ATCTAGCTGG
ATATTCAGCA ACGAAAAAAT GCTACCTGTA GGGTTGCTGC TGCTGGCCAC TATGCTTATT
AGCACAATTC CTTGTATTGC GACTTACAGG GCAATTGAGC CGTAA
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| Protein sequence | MLINFAWQSL LARKVTVGLT VLSVTISLLV MLAIQHIKQE AKTSFTKTIS GVDLIIGART
GQLNLLMYSI FNVGNATNNI SWKSYEELSQ QKEVAWAIPI SLGDSHKGFR VLGTTEAYFE
HFKYANKRTI SFNQGRSFLG TFEAVIGNHI AQKLNYKVGD AITLSHGISA KSFSEHKHNP
FTVVGILAPT GTPIDQTVHV RLDGIEAIHK GWQSGVDLSQ YGNYVNHSNH TKTQDLTPTS
ITAFMVGLNS KLSTFTFQRK VNTYKNEPML AILPGIALSE LWRMMGTVEN ILAIISWLVL
FAALIGLCTI MLAAIRERRH EFSVLRGIGA SPWFIFSLIQ LESLLIVLIS IGVAVLSLWL
GLELTQDMLI SKYGLNISSW IFSNEKMLPV GLLLLATMLI STIPCIATYR AIEP
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