| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1968 |
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| Symbol | |
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| ID | 3967133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2474555 |
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| End bp | 2475802 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921056 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_527440 |
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| Protein GI | 90021613 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.172186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCA ACATTCCCAA GCCAGTCGCC TTATTTCCAG CGCATCCAGA ACTCAAGTCG
CTGGACTTTG GTGAATACAA GGACCTCAAG CAGTTTCTTG ACTCTGGTGA AACCTGGTGG
CAAACCCACT GGAGCTGGGG CCGAGAGTTC CTCAGTTATA TCGGCCGAAA CAAATCCGAA
CACACATTCA CGCGATTCAG GAGCGAAACC GAACGGTTCC TGTTATGGGT TTTTCTTTTT
AAATTCAAGC CTATGGAGCA ACTGCGCAAG GCCGATATTC TGGAATACGC GGACTTTTGT
TGGCAGCCGC CAGTTTCCTG GATCTGCACC GCGAACCATG AAAAGTTTGT TTTCCATAGC
GGGCATTACA CACAGAATCC CTTGTGGGCA CCATTCAAAC TTCAGCTACC CAAGAAAGCC
TCGGACGACC AGATTTTAGA CAAAAAAAAA TATAAGCCAT CTCAACAGAC GCTCGCAGCC
ATGTTTACCG CCGTGATTGC GTTTTACAAG TTTTTGATGA ATGAAGAGTA TCTATACGGT
AATCCGGCAC AAATCGCCAA GTCTGATTGT CGTCATTTCA TCAAGGATGC TCAGGTCAAA
GAAATTAGGC GCTTGTCAGA ATCTCAGTGG CAGTATGTCT TTAATGTTGC GTTGGAGCTG
GCAAATCAAG ACAGAATTTA CGAACGCAGC TTGTTTGTGA TTACCGCGCT AAAAACGCTG
TTTTTACGTA TTTCTGAGCT GTCCGAACGC CCAAATTGGA CACCGGTGAT GAGTCATTTT
TGGCAGGACT CTGACGGTAA CTGGTGGCTG AAAATATTTG GCAAAGGTAG AAAACTACGA
GACATTACGG TCCCAAACAG CTTTATCGAT TATCTCAAAC GATACCGGCA ATTTCGTGGC
CTGAGCCCCC TACCATCCTC AGGCGAAAAT CATCCTATTG TCGAAAAAAT CCGTGGTCAG
GGCGGGATGA CATCCAGACA GCTCATTCGA ATCGTCCAGC AGGTTTTTGA TATGGCCTAC
GAGAAAATGA AGAACGCTGA GGGTGAAGAC AATGCGCGCA AGCTGCGAGA AGCTTCCTCG
CATTGGTTGA GGCACACCGG CGCAAGTATG GAAGTTGAGC GCGGCCGCGC TCTGAAAGAT
TTATCTGAAG ATCTGGGACA CTCAAGTATG GCGACCACCG ACACCATCTA TGTACAGACA
GAAAATCGCG TTCGTGCTGA AAGCGGAAAA AACAGGAAAG TAAATTAG
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| Protein sequence | MPTNIPKPVA LFPAHPELKS LDFGEYKDLK QFLDSGETWW QTHWSWGREF LSYIGRNKSE
HTFTRFRSET ERFLLWVFLF KFKPMEQLRK ADILEYADFC WQPPVSWICT ANHEKFVFHS
GHYTQNPLWA PFKLQLPKKA SDDQILDKKK YKPSQQTLAA MFTAVIAFYK FLMNEEYLYG
NPAQIAKSDC RHFIKDAQVK EIRRLSESQW QYVFNVALEL ANQDRIYERS LFVITALKTL
FLRISELSER PNWTPVMSHF WQDSDGNWWL KIFGKGRKLR DITVPNSFID YLKRYRQFRG
LSPLPSSGEN HPIVEKIRGQ GGMTSRQLIR IVQQVFDMAY EKMKNAEGED NARKLREASS
HWLRHTGASM EVERGRALKD LSEDLGHSSM ATTDTIYVQT ENRVRAESGK NRKVN
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