Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1964 |
Symbol | |
ID | 3967129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2468597 |
End bp | 2469340 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921052 |
Product | hypothetical protein |
Protein accession | YP_527436 |
Protein GI | 90021609 |
COG category | [S] Function unknown |
COG ID | [COG4422] Bacteriophage protein gp37 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCA ACAGTAAAAT TGAATGGACA GAACAAACCT GGAACCCAGT CACAGGCTGC ACCAAGGTGT CTCCGGGTTG CAAGTATTGT TACGCTGAAG TGATGAGTAA GCGTCTGCAA GCTATGGGCG TTAGCGGCTA TGAACGTGGA TTCTCGACTA TATCACTGAT GAGAGAGCGA CTTGATCAAC CACTGCAGAG GAAAAAGCCC ACTGTCTATT TTGTCAATTC AATGAGTGAC TTATTCCATG AAAAAGTGCC CTTCAACTAT ATTGATGAAG TGATGGCGGT TATTGATCAG GCTCCTCAAC ATGCGTTTCA AATCTTGACC AAAAGAGCTG AACGCATGAG GGAGTATTTT GAAACGAGGC GAGCACCTGA TAATGCCTGG CTAGGTGTGT CTGTAGAGGA CAAACAATAC GGAAAACCGA GGATCGCTCA GCTACAGCGG ATTCGAGCGA AAACCCGATT CCTGTCAATT GAACCACTTT TAGAAGACGT AGGACGAATT AGTCTGCGAG GAATTCATTG GGTTATAGTT GGTGGTGAAT CAGGTGTTAA AGCCCGACCG ATGGAAGAAT CCTGGGTTCT CAAAATTAAA TCGCAATGTG AGCGTGCCGG CACCGACTTT TTCTTCAAGC AGTGGGGCGC CTGGGGTGAG GACGGGATCA AAAGGTCAAA ACAAGCAAAC GGAAGAACTC TGCAAGGCCA AACCTGGAAT CAAATACCTG CGATAGCTGT ATAA
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Protein sequence | MATNSKIEWT EQTWNPVTGC TKVSPGCKYC YAEVMSKRLQ AMGVSGYERG FSTISLMRER LDQPLQRKKP TVYFVNSMSD LFHEKVPFNY IDEVMAVIDQ APQHAFQILT KRAERMREYF ETRRAPDNAW LGVSVEDKQY GKPRIAQLQR IRAKTRFLSI EPLLEDVGRI SLRGIHWVIV GGESGVKARP MEESWVLKIK SQCERAGTDF FFKQWGAWGE DGIKRSKQAN GRTLQGQTWN QIPAIAV
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