Gene Sde_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1964 
Symbol 
ID3967129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2468597 
End bp2469340 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content47% 
IMG OID637921052 
Producthypothetical protein 
Protein accessionYP_527436 
Protein GI90021609 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCA ACAGTAAAAT TGAATGGACA GAACAAACCT GGAACCCAGT CACAGGCTGC 
ACCAAGGTGT CTCCGGGTTG CAAGTATTGT TACGCTGAAG TGATGAGTAA GCGTCTGCAA
GCTATGGGCG TTAGCGGCTA TGAACGTGGA TTCTCGACTA TATCACTGAT GAGAGAGCGA
CTTGATCAAC CACTGCAGAG GAAAAAGCCC ACTGTCTATT TTGTCAATTC AATGAGTGAC
TTATTCCATG AAAAAGTGCC CTTCAACTAT ATTGATGAAG TGATGGCGGT TATTGATCAG
GCTCCTCAAC ATGCGTTTCA AATCTTGACC AAAAGAGCTG AACGCATGAG GGAGTATTTT
GAAACGAGGC GAGCACCTGA TAATGCCTGG CTAGGTGTGT CTGTAGAGGA CAAACAATAC
GGAAAACCGA GGATCGCTCA GCTACAGCGG ATTCGAGCGA AAACCCGATT CCTGTCAATT
GAACCACTTT TAGAAGACGT AGGACGAATT AGTCTGCGAG GAATTCATTG GGTTATAGTT
GGTGGTGAAT CAGGTGTTAA AGCCCGACCG ATGGAAGAAT CCTGGGTTCT CAAAATTAAA
TCGCAATGTG AGCGTGCCGG CACCGACTTT TTCTTCAAGC AGTGGGGCGC CTGGGGTGAG
GACGGGATCA AAAGGTCAAA ACAAGCAAAC GGAAGAACTC TGCAAGGCCA AACCTGGAAT
CAAATACCTG CGATAGCTGT ATAA
 
Protein sequence
MATNSKIEWT EQTWNPVTGC TKVSPGCKYC YAEVMSKRLQ AMGVSGYERG FSTISLMRER 
LDQPLQRKKP TVYFVNSMSD LFHEKVPFNY IDEVMAVIDQ APQHAFQILT KRAERMREYF
ETRRAPDNAW LGVSVEDKQY GKPRIAQLQR IRAKTRFLSI EPLLEDVGRI SLRGIHWVIV
GGESGVKARP MEESWVLKIK SQCERAGTDF FFKQWGAWGE DGIKRSKQAN GRTLQGQTWN
QIPAIAV