| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1956 |
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| Symbol | |
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| ID | 3967062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2461730 |
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| End bp | 2462806 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921044 |
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| Product | hypothetical protein |
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| Protein accession | YP_527428 |
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| Protein GI | 90021601 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0111518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.309858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCT TAACAACATT GTTCCCTAAC AAAAAAATTA AAAAGAAAAC GTTGGTTTTA
AGTGTGCTCT TTGCCCAGAT GCTGCTATTC AGTATTTCGC CATTAAATGC CTGGTCGAAA
GAAGATCACG ATCACGAGCA TGAAGCATCA GAACAACATG CACCGCACCA TGAAGATGGT
GATCATGACG AGCACGAGGA CCATGTTGAT CACGATGATG ATGGACATGA TCACGGTGCT
CATGGAGAAG AAGACGAGCA CGGGCACGGT GAGGAAAATA CTAGCCGAAT AGAAGATTCA
ATGGCCAAAC AAGTGGGTAT CGTTACTTCT ATGGCGAGTT CGCAGGAGCT TCATCAGACC
ATCACGGTAT ACGGCGCGAT TGTTTCAGCA CCTGAACAAC TGAGCCATGT GCGTGCGCGT
TTTGAGGGTA TGGTTAAGTC AGTCAAGGTC ACGCTTGGCG ATCGTGTAAA AACGGGTGAT
GTATTGGCTG AAATTGAATC CAACGAAAGC CTGAAAACCT ATGCCATCCG CTCGCCCATT
GCCGGGAGAA TCGTTCAGCG TCATGCCAAT ACCGGCGAAG TGACAAAAGA TCAGGTTCTA
TTTTCCGTCG CGAATTTTGA CACTGTTTGG GCGGAACTGC GTGTTTATCC CGCGCAGCAG
TCTTCCGTCA CAGAAGGGCA AGCGGTTCAC GTTTTAGCAA GTAATCACAG CGTGGAATCC
ACGGTGGACC ATATTGTGCC GTCAATGGAA TCCCCTTATC TGGTGGCGCG CGTCAAGTTG
GCCAATAGCA AACACGCTTT ATCACCGGGC TTAATGATCG AAGCGCGCGT GGAAACCGGT
CGCTTTTCGG TTCCTTTGGC GGTAGTAAAA GATGCGGTGC AAACGCTGGG GGGACGCCAG
GGTGTATTTG TTAAGGCCGG TGATGAATAT CGCTTTACGC CACTTGTATT AGGTAAAAGT
GATGATCATT TCTATGAAGT TATCGATGGG CTTGAAGCGA ACAGCCAATA TGTCAGTGAA
AATAGCTATT TAATTAAAGC TGATATCGAA AAATCCGAAG CAGAACACGA TCACTAA
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| Protein sequence | MNALTTLFPN KKIKKKTLVL SVLFAQMLLF SISPLNAWSK EDHDHEHEAS EQHAPHHEDG
DHDEHEDHVD HDDDGHDHGA HGEEDEHGHG EENTSRIEDS MAKQVGIVTS MASSQELHQT
ITVYGAIVSA PEQLSHVRAR FEGMVKSVKV TLGDRVKTGD VLAEIESNES LKTYAIRSPI
AGRIVQRHAN TGEVTKDQVL FSVANFDTVW AELRVYPAQQ SSVTEGQAVH VLASNHSVES
TVDHIVPSME SPYLVARVKL ANSKHALSPG LMIEARVETG RFSVPLAVVK DAVQTLGGRQ
GVFVKAGDEY RFTPLVLGKS DDHFYEVIDG LEANSQYVSE NSYLIKADIE KSEAEHDH
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