Gene Sde_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1905 
Symbol 
ID3966969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2406705 
End bp2407262 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content48% 
IMG OID637920990 
Producthypothetical protein 
Protein accessionYP_527377 
Protein GI90021550 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTACCG CTATCGAATT AATCGACACT CACCTTAAGC GAAACGGTGT GGCAAAGGAA 
TACGATCTAA TTACTTTGGT AAACAGCCAG TGTGATATTC GGTGGAATGC AAACGCGAAT
ATCGCACTGT TTCAGAAGCA CTTTCTCATT CAGCACTGCT TATACCGTAT TCAGCAATCC
TTGCCCTACG GCTGTGCTCT TACTATTTCA CCGCTTTTAA TTCAGTATTA CCACTCAGAT
AGCAATGTAA CTTCGCAGCT AAGTAATAGT GTGCAGTCGC AAGAGCTGGC AAATTATTAT
TTAGATTGGG CGAACTTTTG CGCGGCCACA GAGGACTCTG TGGTGGAGTT GCTCACCGGC
TTCTGGAAAA AATACGCTGC TCATCAGGCG GGGGATGACG ACTTCCAAAC CTTGGGCTTA
GATAGCAATA GCGAATGGCA AGATGTGCAA AGCGCCTATC GGCGTTTAGC TAGCTCACTG
CACCCAGATA AGGGCGGCAG CGCAATAGAA TTTAACAAGG TGCATGCCGC CTACCAGCGC
CTTAAACAGC GGCGTTAG
 
Protein sequence
MPTAIELIDT HLKRNGVAKE YDLITLVNSQ CDIRWNANAN IALFQKHFLI QHCLYRIQQS 
LPYGCALTIS PLLIQYYHSD SNVTSQLSNS VQSQELANYY LDWANFCAAT EDSVVELLTG
FWKKYAAHQA GDDDFQTLGL DSNSEWQDVQ SAYRRLASSL HPDKGGSAIE FNKVHAAYQR
LKQRR