Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1905 |
Symbol | |
ID | 3966969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2406705 |
End bp | 2407262 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920990 |
Product | hypothetical protein |
Protein accession | YP_527377 |
Protein GI | 90021550 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTACCG CTATCGAATT AATCGACACT CACCTTAAGC GAAACGGTGT GGCAAAGGAA TACGATCTAA TTACTTTGGT AAACAGCCAG TGTGATATTC GGTGGAATGC AAACGCGAAT ATCGCACTGT TTCAGAAGCA CTTTCTCATT CAGCACTGCT TATACCGTAT TCAGCAATCC TTGCCCTACG GCTGTGCTCT TACTATTTCA CCGCTTTTAA TTCAGTATTA CCACTCAGAT AGCAATGTAA CTTCGCAGCT AAGTAATAGT GTGCAGTCGC AAGAGCTGGC AAATTATTAT TTAGATTGGG CGAACTTTTG CGCGGCCACA GAGGACTCTG TGGTGGAGTT GCTCACCGGC TTCTGGAAAA AATACGCTGC TCATCAGGCG GGGGATGACG ACTTCCAAAC CTTGGGCTTA GATAGCAATA GCGAATGGCA AGATGTGCAA AGCGCCTATC GGCGTTTAGC TAGCTCACTG CACCCAGATA AGGGCGGCAG CGCAATAGAA TTTAACAAGG TGCATGCCGC CTACCAGCGC CTTAAACAGC GGCGTTAG
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Protein sequence | MPTAIELIDT HLKRNGVAKE YDLITLVNSQ CDIRWNANAN IALFQKHFLI QHCLYRIQQS LPYGCALTIS PLLIQYYHSD SNVTSQLSNS VQSQELANYY LDWANFCAAT EDSVVELLTG FWKKYAAHQA GDDDFQTLGL DSNSEWQDVQ SAYRRLASSL HPDKGGSAIE FNKVHAAYQR LKQRR
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