| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1888 |
|---|
| Symbol | |
|---|
| ID | 3966952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2383619 |
|---|
| End bp | 2384761 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637920973 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527360 |
|---|
| Protein GI | 90021533 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACAA ATGCATTAAT ATTATCGGGT GGTGGTGCAC GTGCAGCCTA TCAAGCTGGT
GTGCTGCAGG CCGTTGCCGA TATATTGCCA GATCTTCACA ATCCGTTTCC CATTATTTGT
GGCACATCTG CCGGTGCCAT TAATGCCACG GCAATGGCTG CGCACCCTGG CGAGTTTAGA
GCTGCAGCCC TCGATTTAGC CAAAACCTGG CGCTCGTTGG AGATGGATCA GGTATTCCAT
AGCGATTGGT GGTCGTTAAT TAGCGGTGCA TTCCGAGCAG GTGCTTCACT GTTTAACGAT
GGGGTAGGTA AGGACCGCCC TGTGTCACTG CTAGATAACA CTCCCTTGCG AGAATTCCTT
AAAACCGTAA TCCCTTTCGA AAATATCCAA AAACGCGTCG AATCCGGCGA TTTAGAAGCA
CTCTGTATTA CTGCGCTAGG GTACAATTCT GGCGATTCCG TAAGCTTTTT TCAGGGTAAT
GAAACATTAC GTGGTTGGCG ACGCTACCGC CGCGTGGGCA CGCCGTCAGA AATTACCGTA
GAGCATTTAA TGGCCTCTTC AGCTATCCCA GCCGTTTTCC CCGCTGTGCC ATTAAAGCGA
GAGTATTTTG GCGATGGTGC TATGCGACAA ATGGCGCCCA TTAGCCCCGC ATTGCACTTG
GGGGCAGATA GGGTGTTTGT AATTGGTGTG AGTGGTAACC GTAACCCGGT GCATTGGGGC
CGACGCGGCA AAATTCCGCC AAAACACTCG CCCTCGCTAG CGCAAATTAT TGGTCAAATG
TTTAACAGCG CATTTATTGA TGCCCTCGAG GGTGATATAG AGCATTTAGA GCGAGTAAAC
GCCTTGCTCG AACTGGCCGC TCAAGATAGA TGCGAAAAAA CGCTACATCT TAGACCGGTC
GATACGCTTA TAATTTCACC AACAAAAGAA CTGGATAAAA TTGCTGGGCG TAAGATCAAG
CATATGCCCA AAAGCCTAAG ATTCTTTATG CGTAAAACAG GTGCTACTGC AAAAGGTGGT
GGTTCTGCTG CGGCAAGCTA TTTATTGTTT ACCCACGAAT ACTGTAACGA GCTAATGGAG
CTTGGTTATC AGGATGCAAT GTGGTCTAGA GAAAAAATAG AAGCTTTTTT TGCTGACGAA
TAG
|
|---|
| Protein sequence | MGTNALILSG GGARAAYQAG VLQAVADILP DLHNPFPIIC GTSAGAINAT AMAAHPGEFR
AAALDLAKTW RSLEMDQVFH SDWWSLISGA FRAGASLFND GVGKDRPVSL LDNTPLREFL
KTVIPFENIQ KRVESGDLEA LCITALGYNS GDSVSFFQGN ETLRGWRRYR RVGTPSEITV
EHLMASSAIP AVFPAVPLKR EYFGDGAMRQ MAPISPALHL GADRVFVIGV SGNRNPVHWG
RRGKIPPKHS PSLAQIIGQM FNSAFIDALE GDIEHLERVN ALLELAAQDR CEKTLHLRPV
DTLIISPTKE LDKIAGRKIK HMPKSLRFFM RKTGATAKGG GSAAASYLLF THEYCNELME
LGYQDAMWSR EKIEAFFADE
|
|---|
| |