| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1884 |
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| Symbol | |
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| ID | 3966929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2378054 |
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| End bp | 2379088 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920969 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_527356 |
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| Protein GI | 90021529 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0204154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTG AAGCGAATAC AGTTCCTAGC CGTTACGCCG CGAGGCTGTT AGAGCAGGCC
TCTGCCGCTG GTTGTGATGC AGAAGCCCTG CTTGCAGAGG TGGGCCTTAG TTCATCTGAC
TTGCAATCTA AAGATGTTAT TCCCTCGTTA AAATACGGTG AGTTGTACCA GCTTGTTATG
CGCAAAACGC ACGATGAGTG GTTTGGCATG TTCAGCGCAG GCAAGGTGCC GCTGGGTGCA
TTTAGAATAA TGTGCTTAAC TTTGCTGCAA TGTAGCACTC TGCGCCAAGT GATCATTCGC
GCGGGGGAAT TTGCTGAAAT ATGTCGAGGC ATGAACACGC GGTATTACTT AGAAGAGAAT
GCATTAGAGG CTGCCATTAC CCTTCGTCCT GTTAATCATA TTTCTGAGGC AGAGTTTCAG
CAGAAGCTTG ACGAGGCAAA ACCTGTTCAC CTGTTAACTG CAGTACTAAC TTGGCACCGT
TTTGCCGAGT GGCTTGTTGC TAGTGATTTG CCTATTAAGC ATGTGCTGGT TACTTACGAT
AATACACATA CCGAAGAATC ACTTGTTTAT ACAGAAGTGA AATCCATTCT ATTTGAGCAA
CCCTATAACG GCATTGTTTA TGACACGGCC TGTCTTGATT TGCCGGTTGT TCAAAACGAA
GAAAATCTGC TTAATTTTTT ACGTACCGCC CCCTACCATT TAGTGACGGA AGACCCTGCT
CATATCCGTT TTGCCGATAA AGTACGCAAT ATTCTAAAGA AAGACGTAAG TGCTTCTATG
CCATCTTCAG ATGAAGTAGC TAGCCAGTTG CACATGTCTA CAACCACTTT GCGTAGAAAA
CTACAAAACG ACAATACCTC CTACCAACGC TTAAAAGATG AATGCCGAAT GGAAGCCGCA
TTTCATTTGC TTAACTGCGC GGACCTGAGT AATAACGAGA TAGCGCAGAA GCTGGGGTTT
GATGAGCCCA GCGCATTTTT CCGCTCGTTT AAAAAGTGGA CCGGGCAAAC ACCGGGCGAA
TATCGCGCAA GATAA
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| Protein sequence | MSVEANTVPS RYAARLLEQA SAAGCDAEAL LAEVGLSSSD LQSKDVIPSL KYGELYQLVM
RKTHDEWFGM FSAGKVPLGA FRIMCLTLLQ CSTLRQVIIR AGEFAEICRG MNTRYYLEEN
ALEAAITLRP VNHISEAEFQ QKLDEAKPVH LLTAVLTWHR FAEWLVASDL PIKHVLVTYD
NTHTEESLVY TEVKSILFEQ PYNGIVYDTA CLDLPVVQNE ENLLNFLRTA PYHLVTEDPA
HIRFADKVRN ILKKDVSASM PSSDEVASQL HMSTTTLRRK LQNDNTSYQR LKDECRMEAA
FHLLNCADLS NNEIAQKLGF DEPSAFFRSF KKWTGQTPGE YRAR
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