| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1879 |
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| Symbol | |
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| ID | 3966924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2369962 |
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| End bp | 2373468 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920964 |
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| Product | condensin subunit Smc |
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| Protein accession | YP_527351 |
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| Protein GI | 90021524 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00135504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTA AAAGTATCAA ATTAGCGGGT TTTAAATCTT TCGTAGACCC TACAACCGTT
AATTTTCCTA GCAACCTTTG CTCTGTAGTT GGGCCGAATG GTTGTGGTAA ATCGAATATT
ATCGACGCTG TGCGATGGGT TATGGGCGAG TCTTCCGCTA AAAACCTGCG TGGCGAATCC
ATGACGGACG TTATTTTTAA CGGTTCCGGT GGCCGCAAGC CTGTTGGTCA AGCATCTATC
GAGCTTATTT TCGATAACAG TGATGCAACA ATTACCGGTG AATACGCTGG TTTCAACGAA
ATATCTATTA AGCGTAAAGT AACGCGCGAA GCGCAAAACT TTTATTACCT AAACGGCAGT
AAATGCCGTC GTCGTGACAT TACCGACATT TTCCTTGGTA CCGGTTTGGG CCCCAGAAGT
TATGCCATTA TTGAGCAGGG CATGATTTCT AAATTGATTG AGGCTAAACC AGAAGAGCTG
CGCGTATTTA TTGAAGAGGC CGCCGGCATC TCTAAATATA AAGAGCGCCG TCGCGATACC
GAAAACCGTA TGCGCCGTAC GCACGAAAAC CTTGAGCGCT TAACAGATAT CCGCGAAGAG
CTAGAGCGTC AATTACTGCG TTTAGAGCGC CAAGCGCAGG CTGCTGAAAA ATACACCGAA
TTTAAAAAAG AAGAGCGCCA GCTGAAGGCC GATTTGCAAG CGCTGCGCTA TCAAAAACTG
AAGGTACAAG CAGATCAAAA ACAAAACACT ATACGCGACT TAGAGCTAAG CGTAGAAGCG
GGTGTGACCG AGCAAGTTAA ATTTGATGCT CAAATAGAAA AATTCCGTTC AGAGCACACA
GATTTCGGCG ACGCATTTAA CGAAGTGCAG GGCCGCTTTT ACTCAATTGG TGCCGATATA
GCACGTATTG AGCAAACCAT TCAGCATGCG CAAGAGCGCG AGCGTCAATT AAAAGTCGAT
CTCGAGCAAA CAGAGCGCGA TTGTCGCGAA GCTGAAGAGC ATTTAGCGAA TGACACCCAC
AAGGCAGAGG GCTGGGAAGC AGAGCTGTTA GAAATTGAGC CAGACTTGGG CACAATTAAA
GAAACAGAAG AGCTTTCTGC CGCTATGTTG CTTGAATCTG AAGAAGCCAT GCAGCATTGG
CAACAAGAAT GGGATCAGTT TAACCAAACT GCTGCAGAGC CGCGCCAGCA GGCCGAAGTA
CAGCAGTCAC GTATTAAATA TTTAGATCAA GTGCAACAGC GCTTACTCGA CCGTATTCGC
AAGCTAGAGA GTGAGCGAGA AAACTTGGTT GTAGGCGATG TAGAAGAAGA TATCGAAATC
CTCGAAGAAG AGCTTGGTAC TCTCGACCTG CAAATTGAAG AAAAGGCGGA AGCTGCCCAA
CAGGTAGCCG AGGAAATAAC TGAGCTTCGC GAGCGCCAGC AAAAGCTTAC CGACGAGCGA
GATCAATACC GTTCTGAGTT ACAAACCAGC AAGGGGCGGT TTGCTAGTTT AGAAGCGTTG
CATCAGGCTG CCATGGGTGA AAGTGGCGGT GCGGTAAGCG AGTGGCTAGA AACCCAAGGT
TTGGCGGGTA ATAAGCGCTT AGCCGAAAAC TTAGATGTGG AAACCGGTTG GGAAAAGGCG
GCAGAAGTCG TTTTGGGCTC GTCTCTGCAG GCTGTATGTG TTGATTCAAG CCTAGATACT
TTTAGTGACC TGTTAAACGA TTTAACCGGT GGCGAGTTAC TTTTAATTGA GCCGAACGCA
GGGGCAGCTT ATGCCAGCGG TGCAGAAACG CTGGCAAGCA AAATTAAATC AAGCCATTTA
CCTGCGGGTA TTTTGGCGGG CGTATTGGTC GCCGAAGATT TAACAGCGGC AATGGCTATG
CGCAGCAGCC TTACTGCAGA GCAATCTATC GTTACTAAAG ATGGCTTGTG GTTAAGCAAA
AACTGGTTGC GAGTAATTAA AGCTTCCGAT GCTAACGATG GCATTATTGC GCGTAAGCAA
GAGATGGAAA CATTGCGCGA GTCGCTCGAT GTACTGGAAG AAAAAATTGA AACCATTACA
GAAGAGCTAG AGAGCGTTAA GTTACAGCTG TCAGATAAAG AAACTCAGCG CGATAGTTTG
CGCAGCGAGT CGGAACAAAT TCAGCGCAGC CACGGTGAGA CTCGAGCGCA ATTAAGTGCT
AAGCGAGCCA AGGTAGAGCA GGTGCTCGAA GGGCGTGAGC GCACAGATAG GGATATAAAA
GAAGCAAAAG AGCAGCTGAG TGCAGAATCT GAAAACCTAG TTGAAGCGCG TGCAATTTTA
GAAGAAGCCA TTCTCGCAAT GGAGACCGAC ACGGAAAAAC GCGAAAGCTT GCTTAGCCAG
CGTGACGACA TTCGTTCTAA GCTCGATAAC GCAAGGCAAC AAGCGCGACA TGACCGCGAT
CGTGCTCATG AGCTGGCTAT GCGTGCTCAG TCGGTAAAAA CACAGCTAGA ATCCATTAAG
CAGGGAATTC AGCGTTTGCA GGATCAAATG CAGCGCATGC AAGAGCGCCG TGAAACGCTG
CGCATGGCTC TAGAAGAAAA CCGCGACCCT GTAGAAGAAA ATAAATTAGA GCTGGAAGCG
CTACTCGAAA AACGTGTTGC AGTCGAAGAG GAACTCAATC GAGCTAGGCA AGCATTGGAG
ACGGTTGAAA CCTCATTGCG TGATGTGGAG AAGCAGCGTC ATCAGGTTGA GCAGCAAATT
GCCGAATTGC GTATGCGTTT GGAATCATCT CGTTTAGAAG CGCAAACTTT TGCAGTTAAA
AGCGAAAACC TTCGTCAGCA ATTACTTGAT GATGACTTTG ACCTAGAAAA TGTTTTAGCT
AACTTAGATG AAAGCTTAAC TGAAGAGAAT TTAGAGCAAG AGCTAGAGCG TATTGCAAAT
CGTATTTCTC GCTTAGGTGC TATTAACCTT GCCGCTATCG AAGAATATAA AATTGAGAGT
GAGCGAAAGT TATATTTAGA TAGCCAAAAC GAAGATTTAA GAGAGGCACT TGAAACCCTA
GAAAACGCCA TTAAAAAGAT CGATCGGGAA ACGCGGACAC GCTTCAAAGA AACGTTTGAT
CAGGTTAACT CTGGTCTACA AGAGTTGTTC CCCAAAGTGT TTGGTGGCGG TCATGCATAT
TTAGAGCTTA CCGGTGAGGA TATGCTTGAT ACCGGTATTG CGATTATGGC TAGGCCCCCA
GGCAAGAAAA ACAGCACAAT TCACCTGTTG TCTGGTGGTG AAAAGGCGCT AACAGCTATT
GCTTTGGTAT TTTCTATCTT CCGCCTAAAC CCAGCGCCAT TCTGTATGCT GGATGAGGTT
GATGCGCCGC TAGATGACGC GAACGTGGGG CGTTACGCGC GCATGGTTGA AGAAATGTCG
AAGCAGGTAC AATTTATTTA TATTACGCAT AACAAAATAG CCATGGAAAT GGCGCACCAG
CTATTGGGGG TTACCATGCA TGAACCGGGT GTATCCCGAA TGGTAACAGT AGATGTCGAC
GAAGCAGCCG AGCTTGCTGC GAGTTAA
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| Protein sequence | MRLKSIKLAG FKSFVDPTTV NFPSNLCSVV GPNGCGKSNI IDAVRWVMGE SSAKNLRGES
MTDVIFNGSG GRKPVGQASI ELIFDNSDAT ITGEYAGFNE ISIKRKVTRE AQNFYYLNGS
KCRRRDITDI FLGTGLGPRS YAIIEQGMIS KLIEAKPEEL RVFIEEAAGI SKYKERRRDT
ENRMRRTHEN LERLTDIREE LERQLLRLER QAQAAEKYTE FKKEERQLKA DLQALRYQKL
KVQADQKQNT IRDLELSVEA GVTEQVKFDA QIEKFRSEHT DFGDAFNEVQ GRFYSIGADI
ARIEQTIQHA QERERQLKVD LEQTERDCRE AEEHLANDTH KAEGWEAELL EIEPDLGTIK
ETEELSAAML LESEEAMQHW QQEWDQFNQT AAEPRQQAEV QQSRIKYLDQ VQQRLLDRIR
KLESERENLV VGDVEEDIEI LEEELGTLDL QIEEKAEAAQ QVAEEITELR ERQQKLTDER
DQYRSELQTS KGRFASLEAL HQAAMGESGG AVSEWLETQG LAGNKRLAEN LDVETGWEKA
AEVVLGSSLQ AVCVDSSLDT FSDLLNDLTG GELLLIEPNA GAAYASGAET LASKIKSSHL
PAGILAGVLV AEDLTAAMAM RSSLTAEQSI VTKDGLWLSK NWLRVIKASD ANDGIIARKQ
EMETLRESLD VLEEKIETIT EELESVKLQL SDKETQRDSL RSESEQIQRS HGETRAQLSA
KRAKVEQVLE GRERTDRDIK EAKEQLSAES ENLVEARAIL EEAILAMETD TEKRESLLSQ
RDDIRSKLDN ARQQARHDRD RAHELAMRAQ SVKTQLESIK QGIQRLQDQM QRMQERRETL
RMALEENRDP VEENKLELEA LLEKRVAVEE ELNRARQALE TVETSLRDVE KQRHQVEQQI
AELRMRLESS RLEAQTFAVK SENLRQQLLD DDFDLENVLA NLDESLTEEN LEQELERIAN
RISRLGAINL AAIEEYKIES ERKLYLDSQN EDLREALETL ENAIKKIDRE TRTRFKETFD
QVNSGLQELF PKVFGGGHAY LELTGEDMLD TGIAIMARPP GKKNSTIHLL SGGEKALTAI
ALVFSIFRLN PAPFCMLDEV DAPLDDANVG RYARMVEEMS KQVQFIYITH NKIAMEMAHQ
LLGVTMHEPG VSRMVTVDVD EAAELAAS
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