Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1840 |
Symbol | |
ID | 3966844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2333620 |
End bp | 2334096 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637920923 |
Product | gentamicin 3'-N-acetyltransferase |
Protein accession | YP_527312 |
Protein GI | 90021485 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.498361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTAG AGATTAAACA AATCACTGAG AACGAGTTGT CGCAAATGGA AGCGCTGTCA GCTGTTTTTG GTGAAGTATT TTCAGATAAA GAAACTTACA CCGAGAACAA GCCAAGTGCC GACTACGTGC GGTCACTTCT CAGCAGTGAT TATTTCATTG CACTTGCGGC ATTGGATGAA AGCAAGGTCA TAGGAGGATT AGCGGCATAC GAACTCAAAA AATTCGAGCA AGAACGCAGT GAAATTTACA TTTATGACCT CGCAGTTATT GCTGCACACC GTCGAAAAGG TGTTGCAATA GCGCTAATTG AAAGGCTGAA AATAATTGCC GCGGAGCGAG GTGCCTACGT GATATATGTC CAAGCTGACA CCGGGCCAGA GGATAAGCCG GCTATCGAAC TGTATTCAAA ACTTGGAGTG CAGGAAGAGG TTCTGCATTT TGATATTGAG GTAAAAGGAA ATCACGGCGT CACATAA
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Protein sequence | MPLEIKQITE NELSQMEALS AVFGEVFSDK ETYTENKPSA DYVRSLLSSD YFIALAALDE SKVIGGLAAY ELKKFEQERS EIYIYDLAVI AAHRRKGVAI ALIERLKIIA AERGAYVIYV QADTGPEDKP AIELYSKLGV QEEVLHFDIE VKGNHGVT
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