Gene Sde_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1840 
Symbol 
ID3966844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2333620 
End bp2334096 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content44% 
IMG OID637920923 
Productgentamicin 3'-N-acetyltransferase 
Protein accessionYP_527312 
Protein GI90021485 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.498361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAG AGATTAAACA AATCACTGAG AACGAGTTGT CGCAAATGGA AGCGCTGTCA 
GCTGTTTTTG GTGAAGTATT TTCAGATAAA GAAACTTACA CCGAGAACAA GCCAAGTGCC
GACTACGTGC GGTCACTTCT CAGCAGTGAT TATTTCATTG CACTTGCGGC ATTGGATGAA
AGCAAGGTCA TAGGAGGATT AGCGGCATAC GAACTCAAAA AATTCGAGCA AGAACGCAGT
GAAATTTACA TTTATGACCT CGCAGTTATT GCTGCACACC GTCGAAAAGG TGTTGCAATA
GCGCTAATTG AAAGGCTGAA AATAATTGCC GCGGAGCGAG GTGCCTACGT GATATATGTC
CAAGCTGACA CCGGGCCAGA GGATAAGCCG GCTATCGAAC TGTATTCAAA ACTTGGAGTG
CAGGAAGAGG TTCTGCATTT TGATATTGAG GTAAAAGGAA ATCACGGCGT CACATAA
 
Protein sequence
MPLEIKQITE NELSQMEALS AVFGEVFSDK ETYTENKPSA DYVRSLLSSD YFIALAALDE 
SKVIGGLAAY ELKKFEQERS EIYIYDLAVI AAHRRKGVAI ALIERLKIIA AERGAYVIYV
QADTGPEDKP AIELYSKLGV QEEVLHFDIE VKGNHGVT