Gene Sde_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1795 
Symbol 
ID3966740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2285359 
End bp2286393 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content45% 
IMG OID637920878 
Producthypothetical protein 
Protein accessionYP_527267 
Protein GI90021440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00014706 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAA TGTTCAATTT ATATAAGCAT GCACTCCCCA AGGCCGCCAA ACTCTTTGCT 
GGCTCACTGG TTGTTGCCTG CGCATTTACC TCCAATACTT TTGCTCAAAC AAATTCAGAT
GCCCCTTGGT ACCAAATTGA AGTCATTATT GTCGAACGAT TAACTGCCGC CGCACAAACC
GAAGTCTGGC CAAAAGATAT AGTACTGGCC TACCCTGCTA AAAGTCGGTA TTTAGAATTT
ATTGCGGAAG AAGAAACAAC TGACGAGCAA ATGCAAAATC AGCTTACAGC ACAAGAAGGC
ACAATAGCAC CCAGCACAGT AGAAGCAGAC CTAGCCGAGA AACCTTTCAT CCCGCTAGCC
ACAGCAGACC AACAGCTAAA CAGTATTGCT AAAAGGATAG CGCGCACCAA TCACTTACAC
CTTTTATTCC ACCAAGCTTG GCGCCAACCT CTTACAGGCG CCGACCAAGC ACCAGCTATA
GTGGTGCAAG CTGGCAAACA GTTTGACGAC CATTACGAGC TAGAAGGCTC ATTAAAAGTT
AGCGTAAGCC GCTACTTACA TATAGATTCA AATTTATGGC TAACAGCCTT CGAAGCGAAT
TACGGCCAAC CACAAGGACA ATGGCCAGAA CTGCCTGAAG CGCCATTTAA TGTTGCAAAT
ATTGTTATCG AACAGCCTAT TAGCAACGAA TACGGTGACG ATAACGAAAA CCTACTTGGC
GAAAACGTTA ATCAATCTGC AGAACCTGCA CCTTCGGAAA TCAGCTCGCA ACAGCTAGAT
AGCCTACTAT TTGCTGAGCC TACTACCGAT AATCTTGGAG GCTTTAATTT TAATACAGGC
ATGAAACCCG TAAATGAAGC ACCTGAGCCC GAGAAAATTA AGAATTTCGT GGTTACACAA
ATCGTAACTT TGCAGCAGCA GCGAAGAATG CGAAGTGGAG AACTTCACTA TATAGACCAC
CCCAAATTAG GCCTACTAGT GAAAGTAACA CCATACGACC CCAGCGCATC GAGTGGCGCA
GAAGAAACAC AATAA
 
Protein sequence
MKPMFNLYKH ALPKAAKLFA GSLVVACAFT SNTFAQTNSD APWYQIEVII VERLTAAAQT 
EVWPKDIVLA YPAKSRYLEF IAEEETTDEQ MQNQLTAQEG TIAPSTVEAD LAEKPFIPLA
TADQQLNSIA KRIARTNHLH LLFHQAWRQP LTGADQAPAI VVQAGKQFDD HYELEGSLKV
SVSRYLHIDS NLWLTAFEAN YGQPQGQWPE LPEAPFNVAN IVIEQPISNE YGDDNENLLG
ENVNQSAEPA PSEISSQQLD SLLFAEPTTD NLGGFNFNTG MKPVNEAPEP EKIKNFVVTQ
IVTLQQQRRM RSGELHYIDH PKLGLLVKVT PYDPSASSGA EETQ