| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1793 |
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| Symbol | |
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| ID | 3966738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2284181 |
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| End bp | 2284939 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920876 |
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| Product | methylthioadenosine phosphorylase |
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| Protein accession | YP_527265 |
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| Protein GI | 90021438 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0005] Purine nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000109165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAATA AAATAGCAGT TATTGGCGGG TCTGGGTTTT ACACTATGGC GTCTGCCAAC
AACGCCAAAG CTTTAAACCC AGTTAATACC CCTTATGGGT CTGTGGGTGG CTTAATTGAA
TACTCAATGG GCGGGCATAA TATTGTATTT TTAGCTCGTC ACGGCGGTGA GCATAAATTA
CCGCCGCACA AAATAAATTA TCGGGCCAAT ATTTACGCGC TTAAAGAGTT AGGTGTCTCT
CATATTATTG CAGCTAATGC TGTAGGCGGC ATTGGTGAAA GGTGTGGGCC GGGTGTACTT
GTTATTCCCG ATCAGCTAAT TGATTACACC TTTGGGCGCG AAGGTACATT CTTTGATAGT
TTCGAAGATG GTATGAGCCA TATCGATTTT ACTTACCCAT TTGAAGGGCG TGTGCGCAAC
GCGTTAATTC AAGCGAGTGC CGCATTTGAA AAAGAATTTG GCAGCGATAA AGTTGTGCGC
AACGGCGTTT ATGCGTGTAT GCAAGGGCCG CGTTTAGAGA CGGCAGCTGA AATAAAAAAA
TTAAAAAACG ATGGCGCCTC ACTAGTTGGA ATGACCGCAA TGCCAGAGGC GGCGCTTGCT
AGAGAGCTCG GCATCGATTA CGCTTCGATC TGTTTGGTGG TTAATTGGGC GGCCGGTTTG
TCGGCTGGTT TAATAACCCT AGAGGCAATA AATGCAGAGT TAGAAGGCTG TGTAGGAAAA
GCCGAATACC TAATCGGTCA AAGTGTGAAC TATTTCTAG
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| Protein sequence | MPNKIAVIGG SGFYTMASAN NAKALNPVNT PYGSVGGLIE YSMGGHNIVF LARHGGEHKL
PPHKINYRAN IYALKELGVS HIIAANAVGG IGERCGPGVL VIPDQLIDYT FGREGTFFDS
FEDGMSHIDF TYPFEGRVRN ALIQASAAFE KEFGSDKVVR NGVYACMQGP RLETAAEIKK
LKNDGASLVG MTAMPEAALA RELGIDYASI CLVVNWAAGL SAGLITLEAI NAELEGCVGK
AEYLIGQSVN YF
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