| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1791 |
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| Symbol | |
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| ID | 3966717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2282468 |
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| End bp | 2283577 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920874 |
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| Product | small-conductance mechanosensitive channel |
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| Protein accession | YP_527263 |
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| Protein GI | 90021436 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0722785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCTT TTAAATCTAC GCTGCAAGAG TGGTTAGGGG AGCTAGCAGG CAAAGAAAAC
CTTTGGATTG CAGAGGTTTT TATTGTTGTG TTTTGCACCC TTATTGTTGC GCTAGTAGTA
AGTACCTTTT TAAACAAGCT CAAGAAAAAG TCGCTGTTAA CCAAAACCCT TTGGGATGAT
GCGTTTTTTC ATTCTTTGGC AGCGCCAGCA AAATGGTTTG TATGGGTACT TGGCTTAACA
ACTGCAGCAA CAATTGCCTC AAAGCACTCC GAGTCGGCCA TTTTAGAGGC CATTGCCACG
GTTCGCCACG TAGGCTATAT CGTAATTGTT ACTTGGTTTG TAACGGGGTT TATCTCCAAA
GCAGAAAAAA ACTTAATTGA CCCTGAATAC AGTCGTCAGC CTATGGATAG AACCACGGCT
ATGGCGCTGG GTAAATTATT GCGTATATCG GTAATTATTA CCGCGATGTT GGTGGCGTTG
CAGTCGCTGG GCTACAGTAT TTCGGGCGTG TTAGCCTTTG GTGGCATTGG CGGTATAGCG
GTAGGTTTTG CGGCGAAAGA CCTACTTGCC AACTTTTTTG GCGGGTTAAT GGTGTACTTA
GATCGACCAT TTGCTGTTGG CGATTGGATT CGTTCGCCAG ATAAAAATAT AGAAGGCGTA
GTAGAAGATA TAGGTTGGCG TCAAACGCGT ATTCGTACTT TCGATAAGCG CCCACTGTAC
GTACCCAATG CAACCTTTAC TCAAATTTCA GTAGAAAATC CATCGCGTAT GCAGCACAGG
CGCATCTACG AAACCGTGGG TATTCGCTAC GACGACGCCA CTAAAATGGC GGGTATTGTG
GCTGATGTAA AAGCGATGCT GGTAGAGCAT GAGGCGATTG ATCACAATAA TACGCTTATT
GTTAATTTCA ACGGTTTTGC TTCTTCATCG CTGGATTTTT TCATCTATTG TTTTACGCAC
ACAACAGATT GGATTGAATT TCACGAAATT AAACAAGACG TGCTGTTGAA AGTGCTAAAA
ATTATTGAAA AGCATGAGGC TGAATGTGCA TTCCCAACCT CAACGCTACA TGTTCCCGAT
GGAATACAAT TAATGCAGGC GGAAAACTAA
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| Protein sequence | MDAFKSTLQE WLGELAGKEN LWIAEVFIVV FCTLIVALVV STFLNKLKKK SLLTKTLWDD
AFFHSLAAPA KWFVWVLGLT TAATIASKHS ESAILEAIAT VRHVGYIVIV TWFVTGFISK
AEKNLIDPEY SRQPMDRTTA MALGKLLRIS VIITAMLVAL QSLGYSISGV LAFGGIGGIA
VGFAAKDLLA NFFGGLMVYL DRPFAVGDWI RSPDKNIEGV VEDIGWRQTR IRTFDKRPLY
VPNATFTQIS VENPSRMQHR RIYETVGIRY DDATKMAGIV ADVKAMLVEH EAIDHNNTLI
VNFNGFASSS LDFFIYCFTH TTDWIEFHEI KQDVLLKVLK IIEKHEAECA FPTSTLHVPD
GIQLMQAEN
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