| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1727 |
|---|
| Symbol | |
|---|
| ID | 3966533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2200526 |
|---|
| End bp | 2201032 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637920808 |
|---|
| Product | putative flavoprotein oxidoreductase |
|---|
| Protein accession | YP_527199 |
|---|
| Protein GI | 90021372 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGAA GTTCTATCGA GTCAGCGGGT GTCACTCTGG CTCAGCAAAT GCGCGACGGT
ATGCGTCGCT TGGCGTCTGG TGTGTGTGTT GTAACTGCTA ACAACCTACT CAAGCAGCGC
TTTGCCATGA CAGCGTCATC GGTAACGTCT TTATCTGATA ATCCGCCATC GCTATTGGTT
TGTATAAACA CCGACTCGCG AATCAATCAG CCATTGCTCG AAACTCAGTC GTTTTGTATC
AATATACTCT CAGCTTCGCA CCAATTGGTA TCTAACACTT GTGCGTCCCC CAACACTGAT
GAGCAGCGCT TTGAGGTAGG AGATTGGGTT AAAAACCAAG AAACAGGCTT GTATTATTTA
AACGATGCGG AGGCAGTATT TTTTTGCGAA AAAGTGAATG TGCTGCAACA CGGTACGCAC
AATATCTTTA TTGGCAATAT TACTAAGGTA AGTACCAGTC AAGCCGAAGC GACGCCGCTT
ATCTACTTAA ACGGTGGTTA TGTATAA
|
|---|
| Protein sequence | MSGSSIESAG VTLAQQMRDG MRRLASGVCV VTANNLLKQR FAMTASSVTS LSDNPPSLLV
CINTDSRINQ PLLETQSFCI NILSASHQLV SNTCASPNTD EQRFEVGDWV KNQETGLYYL
NDAEAVFFCE KVNVLQHGTH NIFIGNITKV STSQAEATPL IYLNGGYV
|
|---|
| |