| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1698 |
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| Symbol | |
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| ID | 3966485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2169734 |
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| End bp | 2171110 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920779 |
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| Product | uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase |
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| Protein accession | YP_527170 |
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| Protein GI | 90021343 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0715064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTATC TACCCCTCTT TTTCGATTTA AAAGCTAAGC CATGCTTAAT AGTAGGTGGC
GGAACAATAG CCACGCGTAA AGCGCGCTTA TTACATAAAG CGGGCGCTAA GCTACATGTT
GTTGCGCCAA AGGTTTCGGA AGAGCTAGAG AAGCTTGTTG CTGCGTCTAA TGGCAAGGTG
TTTAAGCAAG AGTACGATCA AACGTTTCTA GACGATGTGA TTTTGGTTAT CTCTGCAACC
GATATCGATG CGGTAAATAG CGTTGTGGCG GCAGATTGTC ACGCAATTAA ATTACCGGTG
AATGTGGTCG ATAGCCCCGC ATTGTGCAGC GTGATAATGC CGGCCATTAT TGATCGTTCG
CCCCTAATTA TTGGGGTAAC CAGCGGCGGC GAAGCGCCTG TGTTGGCGCG CCGTGTGCGC
AGTATGCTGG AAAGCTCCAT TCCCGCTGCG TATGGCCAAT TGGCACAGCT GGCCAGTAAA
TTTCGTCAGC GCGCAAAGGA CGTATTCGAA AATGGCGATT TGCGTAGACG CTTTTGGGAA
AATATTTTAA ATGGCCCCAT TGCCGAAAAA GTACTGGGCG GTAACTTGGC AGCTGCAGAG
CAGTTAATTG AGGCGCAGTT AGATAGTGCA TCGGTAGAAA AAACGGGTGA AGTCTATTTA
GTGGGGGCAG GCCCAGGCGA CCCAGATTTG CTTACCTTTA AGGCGCTGCG ATTAATGCAG
CAAGCAGAAG TGGTGCTTTA CGATAGGCTG GTATCGGAAC CTATTTTAGA AATGACTCGC
CGCGATGCCG AGCGTATTTA TGTAGGTAAA AAGCGCGCCG AGCACGCGGT ACCGCAGCAA
AAAATCAACC AAATGCTGCT AGAGCTGGCA CAGCAGGGCA AGCGCGTATT GCGCTTAAAA
GGCGGCGACC CGTTTATTTT TGGCCGTGGC GGCGAAGAAA TAGACCTGCT CGCCGAGCAC
AAAATCCCAT TCCAAGTGGT GCCTGGTATT ACGGCCGCGT CTGGCTGCGC CAGCTATTCT
GGTATTCCTC TTACGCATCG CGATTACTCG CAGTCTGTAC GTTTTATTAC TGGTCATTTA
CAAGAAGGTA AAGAGAATTT CCGCTGGTCT GAGTTTGTCG ATAAACAGCA AACGTTGGTG
TTTTACATGG GTTTAGCGGG GCTAGAAACT ATCTGCAGTA AGTTAATTGA GTATGGCAAA
TCGCCAAGTA CACCAGCGGC CTTAATTGAG CGCGGCACGC TGCCTGAGCA GCGCGTACAT
GTGTCTGATT TAGCTGGACT GGCGGCAAAA ATAGAGGGTT TGGACGTTCA TGCGCCAACT
TTACTGATTA TTGGTGATGT AGTTCGCTGT CACGAAAAAT TAAATTGGTA TAAATAA
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| Protein sequence | MDYLPLFFDL KAKPCLIVGG GTIATRKARL LHKAGAKLHV VAPKVSEELE KLVAASNGKV
FKQEYDQTFL DDVILVISAT DIDAVNSVVA ADCHAIKLPV NVVDSPALCS VIMPAIIDRS
PLIIGVTSGG EAPVLARRVR SMLESSIPAA YGQLAQLASK FRQRAKDVFE NGDLRRRFWE
NILNGPIAEK VLGGNLAAAE QLIEAQLDSA SVEKTGEVYL VGAGPGDPDL LTFKALRLMQ
QAEVVLYDRL VSEPILEMTR RDAERIYVGK KRAEHAVPQQ KINQMLLELA QQGKRVLRLK
GGDPFIFGRG GEEIDLLAEH KIPFQVVPGI TAASGCASYS GIPLTHRDYS QSVRFITGHL
QEGKENFRWS EFVDKQQTLV FYMGLAGLET ICSKLIEYGK SPSTPAALIE RGTLPEQRVH
VSDLAGLAAK IEGLDVHAPT LLIIGDVVRC HEKLNWYK
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