| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1661 |
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| Symbol | |
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| ID | 3965138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2129078 |
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| End bp | 2130079 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920742 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_527133 |
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| Protein GI | 90021306 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000279685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTTT TGAAGCTTGT CCAAAGTAGT AGTCTCCCGG AGGCAGAAGA AGTTTATTTG
CCGAGTCAAG ACAGTTACGA TATGAAGAGC CCGTTGGAGG CAATGGTCTA TTCATATCGT
ATTCTAGCCC ACAGTTATAA ATACGATTCC TTCAACCAAG CGATAACCAG CCTGCTTGAT
GCCGGTATTA AAAAGCTCGG CATGGAAACA GCATTGCTTA CGCGCCCAGT TTCGGCCCAA
ATTTTTGAGG TTGTAGCCTG TGGTGGTAAG TGTGAAGGTT TCTATGTTGG TCAGCATTTA
AGCCTGCAAG AAACACCTTG TTTGACTGTA TTTCAGAAAA ATGAGACGTG TGCATACACC
AATGTTGAGC GGATGTGTGG CAAAGTGCCA GCTATGGCAT ATAATCAAAC ACAAGTAGGT
GCGTATCTCG GAACCTACGT GCAGCCCCAC TTCGCTGAGC CGGGTGTAAT GTGTTTTACG
GCGCCAGAAG CGAGGCTAAC GGAGTTTAGT GCCGAGGACG TGGTATTTAT CGAACTATTG
GCTGAAGGAG TGGCCTTTAT GACTGATCAA CTAAGAGCGC AAGCTCAACG TAAGTTAACT
GACCAGGCGA TGTTTGCCCT GGGTTCTGTG AAAACATTGG ATGAGTATCT CGAACAGGCA
AGGTTGCCTG AGGTGTTTGG GGTGCCCGCA AGAGTAGTGG AGGTGCTTCA GCGCCGAATT
GGTCATGCTC CCCTAAGTAT TGGCCACGTT GCGGAAGAGT TAAATCTTTC AAAACGTACT
CTTCAGCGTC GCTTACAGCA GCAAGATGTA AACTTTGCTG AACTGCGTGA CCAAGTCCGG
TTTCACTATT CCATCGATTA CCTTATTAAG CAGCATCAAA GCATCGACAG TATCTCTGCA
TCGTTAGATT TTTCTGATCG AACTAGCTTT ACCAACGCCT TTAAACGTTG GACAGGTCTT
TCTCCCAGTA CTTTTAGAAA GCTTTTCCGC GATTACGTTT AG
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| Protein sequence | MTVLKLVQSS SLPEAEEVYL PSQDSYDMKS PLEAMVYSYR ILAHSYKYDS FNQAITSLLD
AGIKKLGMET ALLTRPVSAQ IFEVVACGGK CEGFYVGQHL SLQETPCLTV FQKNETCAYT
NVERMCGKVP AMAYNQTQVG AYLGTYVQPH FAEPGVMCFT APEARLTEFS AEDVVFIELL
AEGVAFMTDQ LRAQAQRKLT DQAMFALGSV KTLDEYLEQA RLPEVFGVPA RVVEVLQRRI
GHAPLSIGHV AEELNLSKRT LQRRLQQQDV NFAELRDQVR FHYSIDYLIK QHQSIDSISA
SLDFSDRTSF TNAFKRWTGL SPSTFRKLFR DYV
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