| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1656 |
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| Symbol | |
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| ID | 3965172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2124585 |
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| End bp | 2125667 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920737 |
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| Product | hypothetical protein |
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| Protein accession | YP_527128 |
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| Protein GI | 90021301 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
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| TIGRFAM ID | [TIGR00661] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00119867 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTT TATACGGTGT ACAAGCAACA GGTAACGGCC ATATCACCCG CGCACGCGCT
TTGGGTAAAG AGCTAAAAGC CTGCGGCCTT GATGTAGATT TTTTGTTTTC TGGGCGCGAC
AAAGATAAAT TTTTTGATAT GGCTGAATTT GGTGACTGGC AGTGTTACCA AGGCCTAACG
TTTGTACACG AAGCTGGCAA AACCAAGCTT ATAGATACCA TTAAACAAAA CAGCCTTAAA
ACGTTGTTTA AAGATATTCG AGCATTAGAT GTTTCAGGCT ACGACCTAAT CATTACCGAT
TTCGAGCCTA TTTCTGCTTG GGCAGCAAAA CGTGCGGGCA AACCGTGTAT TGGTATGGGC
CACCAATACG CTTTCAATCA CGCCGTGCCT AAAACGGGTG ACAGCCTTAT TCCCCGTATG
ATTATGCGTA ACTTTGCCCC CGCGAGTATC GATTTAGGTT TGCACTGGCA CCACTTTGGC
TACCCTATTT TGCCCCCCAT TGCCGAAACA CATGTTACCA ACAAAGCCGT AGAGCCTAAC
AAGGTTGTTG TTTATTTAGG GTTTGAAGAC CCAGACGAAG TGGTATCGCT GCTTGAGCCT
TTTACCGATC ACTTATTCAC GGTATATGGC CCGTTTGCGC AATACGAAAG CATGGGGCAC
ATTCAGCTTA AACCGTTATC TAGGGATGGC TTTCAAGAAG ACCTTGCTAC AGCCGCAGGC
GTAATTTGTA ACGCGGGTTT TGAGTTAAGC AGCGAAGCAA TTCAACTAGG CAAAAAACTG
TTGGTTAAGC CATTGCAGGG CCAAATGGAA CAGCTTTCTA ACGCCAAAGC ATTAACCGAA
CTTGGCCTAG GTATGGCGAT GAATAGCTTG GACCCACAAG TGTTAGACAC TTGGCTAAAA
CACGCTAAAG GCAGCCAAGT AAAGTACCCC AATGTAGCAA AAGCTATTGC TCAATGGGTA
AACAGCGGCA AATGGAATAC TCCCTCCTCT AAAGCAGAAC TCGTCGACTC TCTGTGGAAG
CAAGTCCACG CACCAGAAAT AACCCATTTC GGCAGCACCT TGCCCCAGCC ATCCCTCGCT
TAA
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| Protein sequence | MKILYGVQAT GNGHITRARA LGKELKACGL DVDFLFSGRD KDKFFDMAEF GDWQCYQGLT
FVHEAGKTKL IDTIKQNSLK TLFKDIRALD VSGYDLIITD FEPISAWAAK RAGKPCIGMG
HQYAFNHAVP KTGDSLIPRM IMRNFAPASI DLGLHWHHFG YPILPPIAET HVTNKAVEPN
KVVVYLGFED PDEVVSLLEP FTDHLFTVYG PFAQYESMGH IQLKPLSRDG FQEDLATAAG
VICNAGFELS SEAIQLGKKL LVKPLQGQME QLSNAKALTE LGLGMAMNSL DPQVLDTWLK
HAKGSQVKYP NVAKAIAQWV NSGKWNTPSS KAELVDSLWK QVHAPEITHF GSTLPQPSLA
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