| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1588 |
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| Symbol | |
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| ID | 3965655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2040766 |
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| End bp | 2043273 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920669 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_527062 |
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| Protein GI | 90021235 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5276] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.570612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCT TACAAACTAA TGGAATATGC TCCATGGAAA GATTACGCCT ACAAACATTT
TTACAACCGC TTGCGCTAGT TGCTAGCGTT GCGGCAGTCA CCGTCATACC CAACGCTTTT
GCCGACAGCG GTATAGCGCG GTATGTGGCA GCCGATGGGC AAGACGAGTC CGATTGCACC
AATCTTTTCC GCCCCTGCCA ATCCGTTATT TATGCTATTT CTCAATCGAC CAAAACCGAC
CGTGTGTACG TTGCTGCGGG CGATTATCAA ATTAACAGTA CAGACGACGT TTTTACCATT
GTTGCCAATA GCTATCGCTT ATATGGCGGT TATTCGCGTG TTACGCAGTT CAATGCCTCC
ACACCAGAAG AGAGCACCAC AACTTTAATT GGCATTCCTG CCCAGCAACG CACATTATTT
GCAGAGCGAG GCTTCAGAGT TGTAAGCGAC TTAAAACATA TGCGCCCTGC TGAGCGAGCA
AATACGCAGG CGCTTTCTAA AACACTTAGC GCTACGATGC AGTCTCACAG TAAAGCCGAC
TGCGTGAATA ACAGCGCCAA CAATTTCCCG TGCGAAAACA TTAACCTCCT GTCACATGTT
GGATTCAACG ATTTACCGCT AAATGCTAGC GGTGGCAGCG ACATTTGGGG CTTTGTCGAT
TTAAACACTC AACGGGAATA CAGTATTATT GGGTTAGATA CCGGTGTAGC CGTCGTCGAT
ATTACCGATG GCGAAAACCC TTTTGTTGTC GGCTCTGACG ATGGTTTGCG CAACGATTGG
CGCGATATAA AAATATATCA ACATTACGAA ACTAACACCG CACGCTGGCA GGCCTATGCC
TACGTAACTA CCGAAGCAAA CCAAGGCCTA GCAGTTATTG ACATGACAGG CCTACCCAAT
AGCGTTACTA GTGTTAGTTA TGCTTCAGAT ATTACATCTG CCCACAACGT TTATATTGCC
GGCGTGGATT ACACTTTTGG CGCCCCGCTA AAAAGTAACG TGCCCGCTAG CTTAACTATA
GCGGGGGCCA CCAACGGTGG CGTAAACAGA GTTTACTCGC TCACCACTCC CACCGCACCC
AACCTAGTGG GCACAGCCGG TAGTGGTTAC ATGCACGATG GCAGCTCGGT ATTAATTAAC
GACGCAAGAA AAAACACTGA TTGTATAAAC GCGCTCCAAG CAGATAACTG CGTTGTATAT
GCAGATTTCA ATGAAGATGC CATTGTTATT CTCGATTTAA CCAACCCTGC AGCCCCTGAA
GTCATATCTA CCATAACCTA TAGCAATAGT GAATATGTGC ACTCCGGCTG GTGGAGCGAA
GATGCACAAA CTCTATTTGT GCACGATGAG TTAGACGAGT TTTATACAGG CGCTCAAACC
CAAGTACGCG CCTTTAACAT GAGTAACTTG CGCTCCCCTG TTCCTGCAGG TAATTGGCAA
AGTAGTAACA GAACTATCGA CCACAACGGC TTTGTGCGCG GCAATCGCTA CTACATGTCT
AACTACACCG CTGGGTTAAC CGTGTTAGAT ATTACCAACC CGCAATCTAT TACTCGAACA
GGCTATTTCG ATACCGTACC CGCATCAGAC TCCACTCAGT TTTCCGGTGC TTGGGGCGCC
TACCCATTCT ACCCAAGTGG CAAAATTGCA ATTAGCGATA TTAATTCGGG CCTATATATT
CTTCAGGATA AAACACTAGC CAGCACTGCA GGTGAGTTTA CGTTTAGCAC TCAGCAATAT
TCTGGCGAGG AAGGCAACAC AGTAGAAATT AACATAGAAC GCCTAAACGG CAGCACTGGC
GCAGCAACAG TGCAATTAGA ATTACAGCAC TTAACTACCA CTACTTCGGA TATTTCACTC
GACAACACCA GCCTAAGCTG GAGCGACGGT GAAACAGCAA GCAAAAGCGT CACACTAACT
ATTACAGCTG ATGGGTCAGA TGAATCGGTA GAAAGCGCAG CACTATGGCT TAAAAACCCT
CAAGGGGGCG CAACACTTAC AAATGGCGGA CTAGCCTATA TTCAAGTCGC CGACCCCAGT
AGCACCAATA CAATCCAGCT AATGGCCAAC CAATCTGCGC CTGCTGCAAA CGATCAGCCA
TTCATGTTTG TTGCTCAACG ACTAGGCGGC ATAAGCAGTG CAGTAAGTGT AAATTACGAA
GTTAGCTTAA CAGTCAATAG CGCAAGCACT GCAGTTGCAA ATGGCACTAT TGAATGGGCA
GATGGCGAAG CGGCCAATAA AGTTGTAAGC GTACCCGCCA GCGCTTTAAC CGAACTAAGT
GCAGCATCTA TCTTAGAAAT AAACCTGCAA AATGCGATAA ACACTCAATT AGCTAACGCC
ACTGTTTCGA TACAACTACA GAATCAACCC ACAACGCCAA CAACCCCAAC CACGCCCAGC
ACACCATCAG AACCAAGTAA CAACAGCTCT GGTGGTGGCA ATATACCCGG CTATATTCTT
ATAGCTCTTA TCGCTTTGTT GTTGTGTAGG AAAAAACGCA GTGTTTAA
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| Protein sequence | MHALQTNGIC SMERLRLQTF LQPLALVASV AAVTVIPNAF ADSGIARYVA ADGQDESDCT
NLFRPCQSVI YAISQSTKTD RVYVAAGDYQ INSTDDVFTI VANSYRLYGG YSRVTQFNAS
TPEESTTTLI GIPAQQRTLF AERGFRVVSD LKHMRPAERA NTQALSKTLS ATMQSHSKAD
CVNNSANNFP CENINLLSHV GFNDLPLNAS GGSDIWGFVD LNTQREYSII GLDTGVAVVD
ITDGENPFVV GSDDGLRNDW RDIKIYQHYE TNTARWQAYA YVTTEANQGL AVIDMTGLPN
SVTSVSYASD ITSAHNVYIA GVDYTFGAPL KSNVPASLTI AGATNGGVNR VYSLTTPTAP
NLVGTAGSGY MHDGSSVLIN DARKNTDCIN ALQADNCVVY ADFNEDAIVI LDLTNPAAPE
VISTITYSNS EYVHSGWWSE DAQTLFVHDE LDEFYTGAQT QVRAFNMSNL RSPVPAGNWQ
SSNRTIDHNG FVRGNRYYMS NYTAGLTVLD ITNPQSITRT GYFDTVPASD STQFSGAWGA
YPFYPSGKIA ISDINSGLYI LQDKTLASTA GEFTFSTQQY SGEEGNTVEI NIERLNGSTG
AATVQLELQH LTTTTSDISL DNTSLSWSDG ETASKSVTLT ITADGSDESV ESAALWLKNP
QGGATLTNGG LAYIQVADPS STNTIQLMAN QSAPAANDQP FMFVAQRLGG ISSAVSVNYE
VSLTVNSAST AVANGTIEWA DGEAANKVVS VPASALTELS AASILEINLQ NAINTQLANA
TVSIQLQNQP TTPTTPTTPS TPSEPSNNSS GGGNIPGYIL IALIALLLCR KKRSV
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