Gene Sde_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1584 
Symbol 
ID3965114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2034505 
End bp2034861 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content49% 
IMG OID637920664 
ProductMerR family transcriptional regulator 
Protein accessionYP_527058 
Protein GI90021231 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAC CAAGTCATAA CGACGAACTT CCTGAAATAC CCGGTAAGCG ATACTTCACC 
ATAGGTGAGG TTAGCGAACT GTGCGCGGTT AAGCCGCATG TACTCAGGTA CTGGGAGCAG
GAATTCCCAC AGCTAAAGCC GGTCAAACGG CGTGGCAACC GACGTTACTA CCAACGTCAA
GATGTACTTA CCATTCGTCA AATTCGTGCG CTGCTGTACG ATCAGGGCTT TACCATTGGC
GGTGCGCGTC TCCAAATGAC CGACGAAGGT GGCAAAGCCG ATGAGCAGCC AACCAACGAG
TTAGTACAAG ATATAATCAA AGAATTAGAA GAGGTTTTAG CCGTACTTAA AACCTAA
 
Protein sequence
MLEPSHNDEL PEIPGKRYFT IGEVSELCAV KPHVLRYWEQ EFPQLKPVKR RGNRRYYQRQ 
DVLTIRQIRA LLYDQGFTIG GARLQMTDEG GKADEQPTNE LVQDIIKELE EVLAVLKT