| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1576 |
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| Symbol | |
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| ID | 3965105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2024224 |
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| End bp | 2026725 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920655 |
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| Product | ClpX, ATPase regulatory subunit |
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| Protein accession | YP_527050 |
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| Protein GI | 90021223 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000033468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCT CACGCAAACT CCTTGTCGCT TCCTTTATTA GCCTTTTTGC ACTTTTAGTT
GCCGCGCCCT CCTTCGCCGC TGGGTTTACC CCGTCAGCAG CGCAAATAGA GCAATTTAAA
CGCATGTCGC CAGAGCAACA AAAAGCGCTT GCCAGCTCTA TGGGCATTAA CTTAGAAGAT
TATTCTTCAT TAATTGGTGG CGACAGCGCC AGCAGTGCGC AAAATGCAGA AGCCGTGTCT
GGCGTGCGCA AAAAAACGGG CGCAAAAAGC GGCGAGCAAA TTATTGAACA AACAGCGCTG
ACCGGCGTAG ACGCACCCAG CCTAAAAGAA GACGAGAGCG AAGAGTCGAC TAGGCAAAAA
TTAGAGCTTT TTGGTTACGA TATTTTCAAT TACGGCGCAG ATTCCTTCAC GCCAGCATCG
GACATCCCTA TCCCCGCAGA TTATATTCTT GGGCCAGGCG ACAACCTCGT TATACAGCTA
TATGGCAAAG ACAACCAAAC ACTAAACCTC GCTTTAGATA GAGAAGGTCG CATCCAATTC
CCGAACATTG GCCCCGTGAA CCTCGCAGGC CTTACCTTTA GCCAGGCCTC TACTCGTATA
GACACTATTG TTAGCGAGCA AATGATAGGC GTAAAAGCCT CTACCAGCAT GGGTAACCTG
CGCACCATTA GAGTATTTGT ATTGGGCGAA GCCAACGTGC CCGGCTCTTA CGTTGTGGGT
TCACTTTCAA CCATGACAAA TGCTATTTTT GCCAGTGGCG GCATTACTAA AATAGGCTCA
CTGCGCAATA TTCAGCTTAA GCGCCGCGGC AAAGTAGTAA CCACACTAGA TTTGTACGAC
CTGCTGTTAC AAGGCGACAC CAGCAACGAC TCTCGACTGC TGCCTGGCGA CGTTATTTTT
ATTCCACCAA TTGGTAAAAC CGTAGGCGTT GCAGGGCAAG TTAAACGCCC CGCCATTTAC
GAAATAACCA AAGAAGCGGA TGTGCAAGGC GCCCTGAACT TAGCCGGTGG CCTACTGCCC
ACAGCCTATA TGCCAGCCTC GCGCATAGAG CGCATTACAG ACGCAGGCGA AAAAACCTTA
GTAAACCTAG ACCTAACCAG TCGCAGTGGC CGTGAGTTCC GCATTAAAGA TGCAGACGTT
ATTCAAATTC ATACCACCCT AGACACCATG CGCGACATTG TAAAACTGGA AGGCCACGTC
AAACGCCCCG GCGGCTTCGC TTGGCGCAAA GGCATTCGCT TTACCGATGT TGTACCTAGC
GTGGACGATA TGCTGGCCAA CCCAGATATC GATGTAGGCT TAATTTTGCG CGAAGAAAAA
AGCACGCGCA AAATATCTGT GCATTTATTT ACACCTGCAA AAGCGTTCGA CAACCCAAAC
TCGAAGCACA ACCCCGAACT GCAGTCTCGC GACACAATCT TGCTATTTGA TTATGAAAGC
GACCGCAGCA TGCTACTAGA AGACGTACTA GCCCAGTTGC GTACACAATC GAGCTTTACT
GAGCGCGAAA AAATTGTAAT TGCTCACGGC AGCGTGCGCT TCCCCGGCCA GTACCCTATT
TCTGAGGGTA TGACTACTAC CGATTTAATT ATGCTCGCCG GCGGCCTTAC TGAGAGCGCA
CTTGGTAATG ATGGTGAAAT CACTCGCTAC AGCATTGACG AAAACCGCCA AACGCTCGTG
ATGCACATCA ACATCGATTT GAATGCACAA GCTTATCCGT TAACTCCGGG CGACACTTTA
CGCGTTAAGC AGATTCCTCT GTGGAACGAT AAAGAATCGA TAGTGTTGCT TGGCGAAGTA
CTGCACCCAG GCACCTACCC AATTCTGCCC GGCGAATCTA TAGTGGATGT ACTTTCCCGT
GCGGGAGGGT TAACCCCACA CGCCTACCCA GAAGGCGCTA TTTTCTCGAG AGAAGAGCTG
CGCAAACTAG AGGAAGAGCG CTTGGCCGCA TTGAAAAATG AAATTGAAGC AGACTTGGCA
GCAGAAGCAC TGAACGACGG CATATTAAAC AAATCAAAAG TCGATTCAGC GCAAGCAGAG
CAGATTATTG CCAATATGGA TGCGATTAAG CCAATGGGGC GTATGGTAAT AGACCTTCCT
CAAATTTTGG CCAACCCAAA ACTCTATGAT TTTAAATTAG AAAATGGCGA TGTTTTAACA
ATACCGCGCT TTAAACCTTC GGTGACTGTT GTAGGTGAAG TGCAATACCC CACTTCGCAC
TTTTTCGATA AAAAACTTAA CCCCTTCGAC TACATAGATC GCTCGGGCGG CACCAAAGAA
AACGCCGATA AAAAACGCAT TTATATTGTA AAAGCCAACG GCTCGGTTTA TTTGCCAGCC
AACTCCGGCT GGTTTAAGTC AAAAGATCAC AATATTCAGC CCGGCGATAC CATTATTGTA
CCCATGGATA CCGATCGCGT AGACCCGCTC ACCCTGTGGA GCAGCGTTAC TACTATTATG
TATCAAGCTG CGTTGGGCAT AACCGCACTT ACCAAGCTTT AA
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| Protein sequence | MNSSRKLLVA SFISLFALLV AAPSFAAGFT PSAAQIEQFK RMSPEQQKAL ASSMGINLED
YSSLIGGDSA SSAQNAEAVS GVRKKTGAKS GEQIIEQTAL TGVDAPSLKE DESEESTRQK
LELFGYDIFN YGADSFTPAS DIPIPADYIL GPGDNLVIQL YGKDNQTLNL ALDREGRIQF
PNIGPVNLAG LTFSQASTRI DTIVSEQMIG VKASTSMGNL RTIRVFVLGE ANVPGSYVVG
SLSTMTNAIF ASGGITKIGS LRNIQLKRRG KVVTTLDLYD LLLQGDTSND SRLLPGDVIF
IPPIGKTVGV AGQVKRPAIY EITKEADVQG ALNLAGGLLP TAYMPASRIE RITDAGEKTL
VNLDLTSRSG REFRIKDADV IQIHTTLDTM RDIVKLEGHV KRPGGFAWRK GIRFTDVVPS
VDDMLANPDI DVGLILREEK STRKISVHLF TPAKAFDNPN SKHNPELQSR DTILLFDYES
DRSMLLEDVL AQLRTQSSFT EREKIVIAHG SVRFPGQYPI SEGMTTTDLI MLAGGLTESA
LGNDGEITRY SIDENRQTLV MHINIDLNAQ AYPLTPGDTL RVKQIPLWND KESIVLLGEV
LHPGTYPILP GESIVDVLSR AGGLTPHAYP EGAIFSREEL RKLEEERLAA LKNEIEADLA
AEALNDGILN KSKVDSAQAE QIIANMDAIK PMGRMVIDLP QILANPKLYD FKLENGDVLT
IPRFKPSVTV VGEVQYPTSH FFDKKLNPFD YIDRSGGTKE NADKKRIYIV KANGSVYLPA
NSGWFKSKDH NIQPGDTIIV PMDTDRVDPL TLWSSVTTIM YQAALGITAL TKL
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