| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1570 |
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| Symbol | |
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| ID | 3965098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2016225 |
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| End bp | 2018225 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920648 |
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| Product | Signal transduction histidine kinase-like |
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| Protein accession | YP_527044 |
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| Protein GI | 90021217 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.733845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGGGGG GGGGGCGGCG CTCCCCCCTT GTTTTTGCTT ACGATAAACC CGGCTTAACG
CAATATATGT TTCGATTTCA AAACTTGTCT ATTCGTACAA AACTGGTAAG CATTATTTTG
CTGGGTATGG CCAGTGCTAT GACGGTTGCC TTGGCGAATT TTATATTCTT CGAGCTGTAC
TCCGCCAAGC GAAATTTAAC CGATGAGCTC ACGGTGTTAT CCCGCATTAC TGCTGCGCGA
AGTGGAGCGG CGCTAACCTT TGGCGACATT AAAAAAGCGC AAGAGAACCT TTCGCAATTG
GGCATTTTAG ATAGTGTGCA AGCCGCTTGT ATCTACGATG CTGATGACAA CCTATTTGCC
GCTTATACAA GGCATAAACC AAGTAACTTT CTGTGCACAA GCACGCCAGC GTATATAGAA
ACAGCACAGT TTGATGACCG TATAGTGGCG GTGGCCGATA TTACTCACCG CAATGTGTCG
TTAGGCAAAA TTATTGTACT AAGCGATTTA AGCCGTATAG AGCGCAAAGC TAAAAATTGG
GTCAAGTTAG CGGGGTTAAT GTTTTTAATT GCCACCATTG TAGTGGTGGT GATGGCTATG
CGAATGCAAT CTGCTGTTGT GTCACCGCTC AAACATTTAA TGGAAGTTAT GGCGCGAGTG
CGCGATGAAA ACGATTTGGG TATTCGTGCA GTGCCGGCTG GCAACGATGA GCTGGGTAAG
TTAGTCGACT CGTTTAACGA TATGCTGGCG ATGGTGGAAT CCAGCCGAAT GGATTTAGAA
ATTGTGTATA ACGAGCTGGT TTTTCGCAGT ACAAAAGCCG AAACCACGGC GGTAGAGTTA
GAGGCGCGCA ACGAACAAAT TAAAGAGCTA TTGAGTGGCG CCGCGCACGA TTTACGCCAG
CCGTTACAGG CGATGGCTAT TTTTGTCGAT ATGCTGCAGT TTCAATTGGA AGACGAAAAA
TACCTAAACC TAACCGAAAA ATTAAAAGCT GCCATGCACA ACTTGCAGGC TATGTTTACC
GATATTTTAG ATTTTTCGCG GCTCGATCAT AAAGCCGGTA CTGCAGAGTT ACAGGATATA
CATTTAGAAA AACTATTCGG CAAATTACAG TTGGAGTTTG AGGTACTTAC CTTACGTAAG
GGAATCCAGT TTCGCACCCA TGTTAATGCA ATAAGTGTTC GCGGTATTTC TGGTGTAATA
GAACGTATTG TACGCAACTT GGTGAGTAAC GCCGTTAATT ACACCGACAC CGGTGGAGTA
CTTTTAGCAG CACGTAAAAA GCGCGATTGT GTGGTGATAG AGGTGTGGGA TACCGGCATA
GGAATCCCTG AAAATCGCAT AGATTCTGTA TTTAAAAAGT TTGAGCAGGT AGACAATAAA
GGGGTTTCAT CCCACAAGGG TTACGGTTTG GGGTTGGCCA TCGTAAAGCA ATTTGCCGAT
ATGATGGGCT ATAAATTAGA AGTGGTTTCG CGAGAAGGGA AAGGCAGTTG TTTCCGCATG
GTCATACCTA ATGTAGCGAA AGAAAACGCG CAAAGCCGTT CGACGGTTGC GTTTTCTAGC
GATGAAATTT TTGCCGACAA TTACCGCCAA ACCGTATTGT ATGATTCCGA CCAACTCGCC
AATACCATGT TAAAAACCCA TGTTATTTTA GTGGATGATG AACCGGCTAT TCGCTCTATT
CTTGCATTAC TTTTAAAGTC GTGGGATATG GAAGTAACCG AGTTTGCTGG CATGCAGGGC
GTAGAAGATT ACTTTGGCTC AAGCGACTTT CTCGACCCCG ATATCATTAT TAGCGATTAT
CAGCTTGGCC CTAATTTAAC AGGCGATGCC GTAATAGAAG AAATAAGAAT GGCCGTGGGC
ATAGACGTGC CCGCACTCAT TGTTACGGGG AACGCGTCGC CGGCTATTCA CGAAGAAATT
AGAGCAAAGG GGTTTGATTT ACTGCTAAAA CCGGTGGGAG CTGCACAATT GCGAACAGTT
TTACATCGTA TGCTGGAATA G
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| Protein sequence | MRGGGRRSPL VFAYDKPGLT QYMFRFQNLS IRTKLVSIIL LGMASAMTVA LANFIFFELY
SAKRNLTDEL TVLSRITAAR SGAALTFGDI KKAQENLSQL GILDSVQAAC IYDADDNLFA
AYTRHKPSNF LCTSTPAYIE TAQFDDRIVA VADITHRNVS LGKIIVLSDL SRIERKAKNW
VKLAGLMFLI ATIVVVVMAM RMQSAVVSPL KHLMEVMARV RDENDLGIRA VPAGNDELGK
LVDSFNDMLA MVESSRMDLE IVYNELVFRS TKAETTAVEL EARNEQIKEL LSGAAHDLRQ
PLQAMAIFVD MLQFQLEDEK YLNLTEKLKA AMHNLQAMFT DILDFSRLDH KAGTAELQDI
HLEKLFGKLQ LEFEVLTLRK GIQFRTHVNA ISVRGISGVI ERIVRNLVSN AVNYTDTGGV
LLAARKKRDC VVIEVWDTGI GIPENRIDSV FKKFEQVDNK GVSSHKGYGL GLAIVKQFAD
MMGYKLEVVS REGKGSCFRM VIPNVAKENA QSRSTVAFSS DEIFADNYRQ TVLYDSDQLA
NTMLKTHVIL VDDEPAIRSI LALLLKSWDM EVTEFAGMQG VEDYFGSSDF LDPDIIISDY
QLGPNLTGDA VIEEIRMAVG IDVPALIVTG NASPAIHEEI RAKGFDLLLK PVGAAQLRTV
LHRMLE
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