| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1507 |
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| Symbol | |
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| ID | 3965035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1941337 |
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| End bp | 1943958 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920585 |
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| Product | hypothetical protein |
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| Protein accession | YP_526981 |
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| Protein GI | 90021154 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.48117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000051412 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAAACA AGAAAATACC CAGGTTACCC AGTGTATTTA TGGCTGTTTT TACGCTGTTT
TTTGCGTTTT CAGCTTATGC AATAGAACCG ATTGCACTTA GTGCGAGCGG TGATGATGGC
AACGGCCCAA ATAATACGTT AGATAATAAT TTAGGCACGC GTTGGTCGGC GAACGGCAAT
GGCGTATGGA TTGAATATGA CTTCGGAGCA GAAGTTACAA TGGGAGCGGT TGAGATAGCC
TTCTATAAGG GCGATCAACG CAGTGCCACA TTTGAAGTGC AAAGCTCGCT AGATGGAGCA
AGTTGGGATG TTAATTTAAA CACATTCTCA AGCGGTTCAA CTTTGGCTAT GGAACCCTAT
ACGCTAAATG TTCAGGCGAG ATACTTCCGA ATAGTTGGTT ATGGAAATAC AAGTAATACT
TGGACGAGCA TTACTGAAGT GAACTTCGTG GAAGGGGATG GCCCAATTCC ACCCGAGCCC
CCTGTAGAAG GGCAGCTAGA TGTACATTCT GTGGTTGCAA GTAGTGATGA CGGGAATGTA
GCGAGTAACA CTCTAGATGG CTCGCTAAGT ACGCGCTGGT CGGCGAATGG GAATGGTCAA
ACCATTACTT ACAATTTGGG CAGTATGCAA TTGGTAAAAA GTGTGAGCAT GGCTTTTTAT
AAAGGCGATC AGCGAAGCGC TACTTTCGAT ATTCAAGTAA GCCCAGATGG ATCTAATTTT
TCCACTGTGT TTAGCGGGGA AAGCTCGGGT AACACGCTTG CGTTGGAAGA GTTTGATATA
CCCAATATGC CTGCACAATT TGTACGTATT GTAGGGTACG GTAACAGCGC TAACTCTTGG
AACAGCATTA CAGAAGTAGA AATATATGGC GGTGGTGATA TTAGCAATGT GCCTCCTGTT
GCCAGCTTTG ATATTGATGA CGAAGTTTCG ATTGATGTGG CGTTAGTTTT CGACGGTTCG
AATTCCTTTG ACCCCGATGG CGGCAGCTTA GCTTCATACA GTTGGGATTT TGGCGATGGC
AGCGATGCAA CCGGGGCAGT GGTTAACCAC ACATACAGCG CTGGCGGTAG CTATATTGTT
AGCTTAACTG TAACTGACGA TGAAGGGGAT AGCGCAACGG CTACCCATGC CATTACTGTT
GACGACAATA AAGAACCGCC TGTTGTGGTG ATTGGCGCAC CCGCAAGTAC CGCGCCGAAT
GTTGTGCTAA ATATTGATGG TAGTGCTTCG TTTGACCCTG ATGGCGGTAA CCTTGCAAGC
TACTTATGGG ATTTTGGCGA TGGCACGTCC AGCTCGGACG TAGCGCCGCA AAAATCGTAT
AGCTCAGATG GTGTGTTTGA ATTGTCTTTA ACTGTAGTCG ATGATGAAGG TGAATCTACA
ACGGCAACTC AAACTATTCG AGTGAGTTCG GTTAACCCAG ACTTTGAATT GTGGCCACTA
GTGAATGCGA GCTTTGAGCT TAGCACTTCA GAAGGTGGTT GGTTAGAGGT CGACCCTGCA
AACGTTGTAT CCATGAATGG TACTTCTAAT CCACAGCCAC CTGAAGGCGG TAGGTTATTA
GTTATCGACG GCGATGGCGG TATTATCAAG CAGGCGATTT ATAAGCCTAT TGCCGGCCAC
GTATACGAAA TTACAGCTTA TGTGTATGGC CACGGTACCA TCGGCATACA AGATTTAGGC
TCCGATAACG TATACGAAAC CAGTACGGCG CACGGCAACA GCTGGCAACA AATTTCTGTA
ACCTATGTGT CTACGGGGTC ACCGGCAATG CTTTACGCCA AGTATGGCCC AGGCTCTGGC
GATTCTTATT TTGATGTTTT CGACGCGAAA GATATTTCAA CCGCCGAAGA TTTGAGTAAG
CAACCTCCTG CACCAATAAT GCGTTATGCC TCACAAGTTA TCGATCTTTC TTGGTGGAAA
ATTACATTGC CAATTAACAA TGCAATGGAA ATTTACACCC CAGAACTTTT AACTTACGAA
ATAGACCCTT GGTTTAAATT AGTTGAGGAT GAGGACGGGT ATGCAGTGCA ATTCCGTGCG
AATCATGGTG GCTCTACAAC AGGTGGTTCA TCCAACCCGC GCAGTGAATT GCGTGAATTA
ACCCAAAATT ATCATTACCG TAATTCAAAA AGTGCAGCAG CTTGGAGTAA TACAAGCGGT
ACGCATGAGA TGTGGATTAA GCAAAAAGTT ACCCACTTAA CTTACGTAAA ACCACATGTA
GTTGTTGGGC AAATTCACGA TAGTGGCGAC GATGTTACCG TGTTCCGAGT AGAAGGGCAC
CTAGGGCAAG GCGGTGACTG GGATAACAAT GGCACTGTTG GGGTAATGGA TACCCACGCA
AACATATGGA TTACAAACGG CAACGATCGC CATGGTTACC TTGTGGATGA TAATTACGAG
CTAGGTACAG TGTTTACCGT TAAGTTTATA GCGCGAGATG GCAAGGTGGA ATATGAGTAC
AACGGCCGTA AACTCGATTA TGTGCACGAG GAAAGCTTCT CTGGCGCATA CTTCAAGCTA
GGCAACTACA CGCAATCTCA TAACGGTACA GCACCCGGCG AAACGGATGA CGCCTATGCA
GAAACCTATG TTTACGACTA TTACATAAAG CACACCGAGT AA
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| Protein sequence | MRNKKIPRLP SVFMAVFTLF FAFSAYAIEP IALSASGDDG NGPNNTLDNN LGTRWSANGN
GVWIEYDFGA EVTMGAVEIA FYKGDQRSAT FEVQSSLDGA SWDVNLNTFS SGSTLAMEPY
TLNVQARYFR IVGYGNTSNT WTSITEVNFV EGDGPIPPEP PVEGQLDVHS VVASSDDGNV
ASNTLDGSLS TRWSANGNGQ TITYNLGSMQ LVKSVSMAFY KGDQRSATFD IQVSPDGSNF
STVFSGESSG NTLALEEFDI PNMPAQFVRI VGYGNSANSW NSITEVEIYG GGDISNVPPV
ASFDIDDEVS IDVALVFDGS NSFDPDGGSL ASYSWDFGDG SDATGAVVNH TYSAGGSYIV
SLTVTDDEGD SATATHAITV DDNKEPPVVV IGAPASTAPN VVLNIDGSAS FDPDGGNLAS
YLWDFGDGTS SSDVAPQKSY SSDGVFELSL TVVDDEGEST TATQTIRVSS VNPDFELWPL
VNASFELSTS EGGWLEVDPA NVVSMNGTSN PQPPEGGRLL VIDGDGGIIK QAIYKPIAGH
VYEITAYVYG HGTIGIQDLG SDNVYETSTA HGNSWQQISV TYVSTGSPAM LYAKYGPGSG
DSYFDVFDAK DISTAEDLSK QPPAPIMRYA SQVIDLSWWK ITLPINNAME IYTPELLTYE
IDPWFKLVED EDGYAVQFRA NHGGSTTGGS SNPRSELREL TQNYHYRNSK SAAAWSNTSG
THEMWIKQKV THLTYVKPHV VVGQIHDSGD DVTVFRVEGH LGQGGDWDNN GTVGVMDTHA
NIWITNGNDR HGYLVDDNYE LGTVFTVKFI ARDGKVEYEY NGRKLDYVHE ESFSGAYFKL
GNYTQSHNGT APGETDDAYA ETYVYDYYIK HTE
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