Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1501 |
Symbol | |
ID | 3965029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1934122 |
End bp | 1934772 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637920579 |
Product | hypothetical protein |
Protein accession | YP_526975 |
Protein GI | 90021148 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0508793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000844236 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGTTT TGAGCTGGCT GGCAATACCT ACTATACGAG ATCGGTTGGT TGTTATGTCT AAAATATTTA TTTTAAGCCT ACCTAGAACC GGCACCACAA GCACGTGTAT TTATCTGCTT GAGAGCGGTT ATAAAGTTGC TCACACCGCG TTTAATGAAG CTGCATTTGA GTTGGCAGAA GTGGTTGCCG ACACGCCTGT ATTTATCGAC TACGCAAGCT TGTATTCGCG ATACCCAAAT TCCAAATTTA TTTACTTGCA ACGCCCTGAG GGAGACTGGT TGGAGTCTAT TCGAAGGTTG TTGCTTAGTA TGCGCAAGCG ATGGCTAGCC GATAGCAATT TTTTTGAAAG TGATATTAAG CGCTGCTTTT TGGCGGCGTT TCCAGAGTTC TGTTCAAAAA AAGAATTTAG TAATGAGTAT TTACTTTCTT GCTATCGTAA GCATCAAATA GCTGTGGATA GGTTCTTTAA CGATAAGCCC GAGCAGCTAT TAAGGGTAGA TATAACCCAG CTCGGTGCAG GTGAAAAAAT CCTGAAGTTT TGCGGTAAAG CTCTCGGTGG TTCATCGAAT GAGTTACCGC ATGTAAATAA AGGGCGGCGT ATTACTTACT GGGAAACTAT TGAGCACCCA AATAAAGTAT TCTCTAAATA A
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Protein sequence | MIVLSWLAIP TIRDRLVVMS KIFILSLPRT GTTSTCIYLL ESGYKVAHTA FNEAAFELAE VVADTPVFID YASLYSRYPN SKFIYLQRPE GDWLESIRRL LLSMRKRWLA DSNFFESDIK RCFLAAFPEF CSKKEFSNEY LLSCYRKHQI AVDRFFNDKP EQLLRVDITQ LGAGEKILKF CGKALGGSSN ELPHVNKGRR ITYWETIEHP NKVFSK
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