Gene Sde_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1501 
Symbol 
ID3965029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1934122 
End bp1934772 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content41% 
IMG OID637920579 
Producthypothetical protein 
Protein accessionYP_526975 
Protein GI90021148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0508793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000844236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGTTT TGAGCTGGCT GGCAATACCT ACTATACGAG ATCGGTTGGT TGTTATGTCT 
AAAATATTTA TTTTAAGCCT ACCTAGAACC GGCACCACAA GCACGTGTAT TTATCTGCTT
GAGAGCGGTT ATAAAGTTGC TCACACCGCG TTTAATGAAG CTGCATTTGA GTTGGCAGAA
GTGGTTGCCG ACACGCCTGT ATTTATCGAC TACGCAAGCT TGTATTCGCG ATACCCAAAT
TCCAAATTTA TTTACTTGCA ACGCCCTGAG GGAGACTGGT TGGAGTCTAT TCGAAGGTTG
TTGCTTAGTA TGCGCAAGCG ATGGCTAGCC GATAGCAATT TTTTTGAAAG TGATATTAAG
CGCTGCTTTT TGGCGGCGTT TCCAGAGTTC TGTTCAAAAA AAGAATTTAG TAATGAGTAT
TTACTTTCTT GCTATCGTAA GCATCAAATA GCTGTGGATA GGTTCTTTAA CGATAAGCCC
GAGCAGCTAT TAAGGGTAGA TATAACCCAG CTCGGTGCAG GTGAAAAAAT CCTGAAGTTT
TGCGGTAAAG CTCTCGGTGG TTCATCGAAT GAGTTACCGC ATGTAAATAA AGGGCGGCGT
ATTACTTACT GGGAAACTAT TGAGCACCCA AATAAAGTAT TCTCTAAATA A
 
Protein sequence
MIVLSWLAIP TIRDRLVVMS KIFILSLPRT GTTSTCIYLL ESGYKVAHTA FNEAAFELAE 
VVADTPVFID YASLYSRYPN SKFIYLQRPE GDWLESIRRL LLSMRKRWLA DSNFFESDIK
RCFLAAFPEF CSKKEFSNEY LLSCYRKHQI AVDRFFNDKP EQLLRVDITQ LGAGEKILKF
CGKALGGSSN ELPHVNKGRR ITYWETIEHP NKVFSK