Gene Sde_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1440 
Symbol 
ID3966157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1859613 
End bp1860509 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content43% 
IMG OID637920517 
Producthypothetical protein 
Protein accessionYP_526914 
Protein GI90021087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGCC TACTTAGGAT AAGAGCAATA AGGTTAATAT TAATGGCATA TGTGGCTTGG 
GCACTGCCCG CAAAGGCATC GGCCACCGAG CAAATAAGCC CAGCTACCAA AATAGTCATT
ACCCGATACT GTGGGCAGTC TATTACCCCA GGTAATGCGC ACATTGAAAA ACTTATATAT
TTAGCTTTTT CAAAACTCAA CATCCAGCCT ACATTCAATA ATGTTAACCA ATACTGTAGC
CACTCAAGGG AAGTAAAATT TTTACAGGAA GGTAAAAGCG ATATTCTGTG GGCAACCACT
ACAGCAGACT ACGAACAACA GCTTATTCCT ATTCGCATAC CAATATATAA GGGTTTGTTG
GGCTACAGAA TTGCGCTTAT TAGAGCTGAA GATAAAGGTA AATTCGCGCA TATAACCACC
CTAGAACAAC TGCAAACGCT GCGGTTTGGG CAAGGTGAAG GCTGGGCAGA CACAGCCATT
TTAAAGGAAG CAGGGCTAAA GGTGACCGAA AGCTCTGATG TGCATAACTT GTTTAACATG
CTGCGTGCGG GCCGTTTCGA CTTGTTTCCT CGGGGTTTAA TGGAGCCCTG GGAAGAAGTA
AAACAACTGC CCACAATGAA CTTTGCTGTA GAAGAACACA TACTTATTGT TTACCCGTTA
CCGGCATATA TTTTTGTGTC CCCTAAGCGC CCCGAACTCG CCAAGTTAAT ACTTACAGGC
CTAGAGTTAG CAATCCAAGA TGGCAGCTTC GACAAACTTG TAATGGCAGA CCCAAACGTT
CAACAGGCGC TTAGGCTTGC GAATATTAAG CAGCGAAAGA TTTTCTATTT AGAAAACTCT
ACACTAACAA AAGAAACACC GTTAAGTAAT AAAGCGTTAT GGGTAAACCT TAAATAG
 
Protein sequence
MIGLLRIRAI RLILMAYVAW ALPAKASATE QISPATKIVI TRYCGQSITP GNAHIEKLIY 
LAFSKLNIQP TFNNVNQYCS HSREVKFLQE GKSDILWATT TADYEQQLIP IRIPIYKGLL
GYRIALIRAE DKGKFAHITT LEQLQTLRFG QGEGWADTAI LKEAGLKVTE SSDVHNLFNM
LRAGRFDLFP RGLMEPWEEV KQLPTMNFAV EEHILIVYPL PAYIFVSPKR PELAKLILTG
LELAIQDGSF DKLVMADPNV QQALRLANIK QRKIFYLENS TLTKETPLSN KALWVNLK