Gene Sde_1424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1424 
Symbol 
ID3966102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1842827 
End bp1843942 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content45% 
IMG OID637920501 
Productpotassium efflux system protein 
Protein accessionYP_526898 
Protein GI90021071 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA CTGTACTAAT AATTGGCGGC TACGGAAACT TTGGTAGGTT TATTTCTACT 
GAACTGGCCA AAACCAGTGG TATAAAACTC GTTATTGCAG GTAGAAATGT AAGCAAAGCA
CAGGCGCTTA TTCAACAATT AAAAACCTCG CCAAAAACCT GCGCGCAGAT AGAGGCTTGC
GAACTAAATA TTTACCACAA TTTGGCGGAG CGCTTAGCCA CGCTAAAACC AACTGTGGTT
ATACATACCT CAGGGCCATT CCAAAACCAA ACCTACCATG TAGCCGAAGC ATGCATTCAA
GTAGGCGCTC ACTACATTGA CCTAGCAGAT GCCAGGCAAT TTGTTGCAGA CATAGCAGAT
TTAGATAAAG CCGCAAAAGC AAAGAACGTA CTAGTATGTG CGGGTGCAAG CTCAGTACCG
GCATTAACCA GCGCAATTAT AGATAACTAT TTACCGATGT TTGACCAGCT TGAAAGCGTG
GATTACGCCA TAGCTACAGC GCAACTTACC AACCAAGGGC TAGCGACCAC CGCTGCCGTT
CTAAGCTATG CAGGCAAACC CTTTTCGCAA TTAAAAGCAG GTAAACCGCA TACTGTGTTT
GGCTGGTTAG ACACTCGTCG GCGCGAGTTT TGGCAGCTAG GGGCTAGGTT ACTTGGTAAT
TGCGATATCC CCGATTTAGC CCTCTTCCCG CAGCGCTACC CATCTATAAA AAATATTCGC
TTTCAGGCAA GCCTAGAGGT GAAGTTACTC CACCGCTGCC TTGCTATTTT TTCTGGCGCG
GTGAAATTGA AATTGTTGCC GAACATCCAG TCGTGGGCAA AAACGCTTCT TGGTATTTCG
CGACTATTTG ATTTTTTAGG CCACGATAAC AGCGGCTTTT ATATGGCGTT ATCCGGCACA
TGCAATGCGC AACCAAAAAC TGTTTTGTTT GAAATTTCGG CAAAACACGG TGATGGCCTT
TATATTCCTT GCATACCTTC TATTTTACTC ACCCAAAAAC TACTAAGTGG CGCAACCACA
GATCGTGGAG CCAAAGCCTG CATGGGGTTA ATCACACTAA ACGAGTATTT ACACGCATTA
GAGCCGCTAA AAATTGGTTG GCGAGAAACT TTATAA
 
Protein sequence
MNNTVLIIGG YGNFGRFIST ELAKTSGIKL VIAGRNVSKA QALIQQLKTS PKTCAQIEAC 
ELNIYHNLAE RLATLKPTVV IHTSGPFQNQ TYHVAEACIQ VGAHYIDLAD ARQFVADIAD
LDKAAKAKNV LVCAGASSVP ALTSAIIDNY LPMFDQLESV DYAIATAQLT NQGLATTAAV
LSYAGKPFSQ LKAGKPHTVF GWLDTRRREF WQLGARLLGN CDIPDLALFP QRYPSIKNIR
FQASLEVKLL HRCLAIFSGA VKLKLLPNIQ SWAKTLLGIS RLFDFLGHDN SGFYMALSGT
CNAQPKTVLF EISAKHGDGL YIPCIPSILL TQKLLSGATT DRGAKACMGL ITLNEYLHAL
EPLKIGWRET L