| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1393 |
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| Symbol | |
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| ID | 3968662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1800168 |
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| End bp | 1805291 |
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| Gene Length | 5124 bp |
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| Protein Length | 1707 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920469 |
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| Product | thiol oxidoreductase-like |
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| Protein accession | YP_526867 |
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| Protein GI | 90021040 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3488] Predicted thiol oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.619739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.222979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC AAAAGCGATT GTCCGCTGGG TTAATTGCAA AGTTAGCGTT GGCTTCAGGC
CTTACGCTAG TCGCCACTGC GGCCACCCAC GCCGACGTTA CCAATCCTGT TATTGGTAAT
TTAATCTTTG AAGAGAATTT CAATACCCTC AACAGCGATC GTTGGAATGT GATTGAGGGT
GATGGCTGCC AATACGGCCC AAACCTTTGC GGTTGGGGCA ACCAAGAATT GCAGTATTAC
CAAGATAGCA ATGTAACCAT CGAAGATGTG CCCGGAGAAC CGGGCAACAA AGCGGTTGTT
TTTGAAGCGC GCAACGAAAC TGTAAATGGC AGTGCGTTTA CATCCGGCAA AATTGATTCG
GAAGACGGAA TAGCCATTAA GTACGGCATG ATTGAGTTCC GTTTGCGAGT ACCAAATATG
GGCGTTGGCT ATTGGCCTGC GGTTTGGATG CTTGGCACAA GCACAGAAAG CTGGCCGAGC
AAAGGCGAAA TAGACATGAT GGAAATGGGC CATCGTGCCC AAGGCATGGC CGATGCGGGC
CACCCAGGCA CAAACCTAAA CAACTACACC GCGGCCAATG CAATTTTTTA TGCAGAAGCA
GCCTGTGTAC CCGAAAACCC CACCTGTGCA GCCATGACCG CATGGCAAAC AGATAACGCC
TATGTTTCTC AAACGTCTAT GGGCGAGCGA TTTGTTATTT ACCGCACTTA TTGGACCGAC
ACCCAGTTGC GTTTTACCGT AATTGATAAT GGCGTTGAGT ACGATATGTA CGATGATCCA
ATTACTATCG GCGAAGAGGC TACTGAGCTG CAACAGCCGT TTTATTTGTT GGCAAACTTA
GCAGTTGGCG GCAATTTTAC CGATGCGTCT ACACCTGCCG AAGTTACCGC ACAGCTGCCC
GGTAAAATGT ATTTAGACTA TATTCGTGTG TACCAATTAG ACGGTATGGG CGAAATATTC
GAAGGCTCAA TTGCCCAAAA AGAATACGGC ACATTTGGTG TGTTTACCGA TGACACGCCC
ACCAGCAATA AGCTGGTAGC CGGTGATACG TCACAAATTT ATATTTGGAA TCAAAACTCC
CTAAGTGAAG GAACGCTTGC GCCCGCCGAA GGCGACAATG TAATAGCCTG GAACTACACC
GCGCCAGAGT GGTTCGGTGC TGGCATTCAA GCTGTGCACG CGCGCGATAT GAGTAATTTT
GAGAATGGCG AGTTTAAATT CAAAATAAAA ATACCCGCTA ACGTCTCATT TAAAGTTGGT
TTTGCAGATA CTTACACCAA CGAAAACTGG CTAACTTTCC CTGCTAATCA AACAACCTAC
GGTTTGGTGC GCAATGGCGA ATGGGCTGAG GCGACAATTC CAGTAGCGGA CTTGCGCGGC
AGTTTAATTG CATTGCAGTC TATGGCTGGT ATGTTTTATA TCGCCAGTGT TGACGGCCAA
ATTCCAACGT CTAATTTTGA ATTTGCCATC GACGATGTGC GCTGGGAAGG CGGTGGTGCA
GGGCCTGTAG ACAGCGACGG CGACGGCGTA GCTGATGAAC TTGATCAGTG CCCCAACACA
CCAGCCGGTA CTGCAGTAGA TAGCGTTGGC TGCCAAATAG GTTTGCCACA GCCTGTGGCT
GTAACGGTAG AAGCGGAAGA CTACGAAGCT TACTACGATA CAACCAGTGG CAACTCTGGC
AATGCGTATC GCAGCGATGA TGTAGATATA GAAGCTGCAA GCGAAGGTGG TTTTAACGTC
GGTTGGACTG ATGCTGGCGA GTGGATGGAT TACACTTTAA ACCTCGCTGC GGGCACCTAC
GACGTTACAG CTCGTGTTGC TTCAAATACC GATACTGGTG TGTACAGTGT TAGTTTAGAT
GGCACCACAA TCGGCTCTAA CGGAGTTGCA ACTGGCGGTT GGCAAAACTG GGTTACTCAA
GTTGTCGGCC AAATTACGGT AAATGGCGGT CAACAAACTC TGCGCATTAG TACTGATGTG
GCTGGATATA ACATTAACTG GGTGCATTTT GAGCCCGTGC CAGACGCAGA TAACGATGGC
GTACCTGACA GCCAAGATAA CTGCCCCAAT ACACCAGCGG GTACAGAGGT GGATGCTAAT
GGCTGTGCGA TTGTCGTAGA CCCAGTACCC GTGCACATAG AAGCCGAAGA TTACGCGGCC
TATCACGACC TATCTGCAGG TAACAATGGC GGTCAATACC GCTCTGATGA TGTGGATATT
GAAGCCGCTA GCGAAGGTGG ATTCAACGTA GGTTGGACAG ATACTGGCGA GTGGTTGGAA
TACTCGGTTG AATTAATTGA AGGTGTTTAT GACCTAACTG CACGCGTGGC ATCGTTAAGC
GGCAATGGCG CTTACAGCGT TTCTATTTCT GGTCAAGCTG TGGGTGGGTC TAATGCTGTA
GCGACTGGTG GTTGGCAAAA TTGGGAAACC CAGCACGTAG CGCGTTTTGT TGCAGGCACG
GGTACCTACA CTATTCGTGT AAATGCAGAT GCCGGCGGCT TTAACCTTAA TTGGTTGCAC
TTAGAGCCAG TAAACGACCC CGATAGCGAT AACGACGGTG TGCCAGACAG CCAAGACAAC
TGCGCCAATA CCCCTGCCGG CACCGAAGTG GACGCCAGCG GTTGCCCGGT AGTTGTACAG
CCATTTGGTG TGACTCAGTC AGATTCCAAC AGCGCGCAAT TTTATGTAAA TGGCGCCGAC
TGGGCAGTGT TGCATTACAG TGTTAATGGC GGTGGGCAAG TGAATGTGTC CATGAGTTTG
GAAAACGGTA AGCATGTATA TACCGTGCCA GACTTGGCCC CAGGTGACTC CATTAGTTAC
TTTGTTACCT ATTGGGACCC AGAACTAGGC GGTGCACGCG ACAGTGAAAC GGTAAGCTAC
AGCGTAGTTG CTGCGGGTAG CGATAGTGAT GGCGACGGCG TAGGTGATAG TGCTGACCAA
TGCCCAAATA CACCCGCCGG CACAGCTGTC GATTCTGTTG GTTGCCCAGT AACACAGCCA
CCATCCGATA GTGACAACGA TGGCGTTACG GATGCTAATG ATCAGTGCCC AAATACACCT
GCAGGTACAT CGGTTGATTC CGTTGGCTGC CCAGTGGTTC AGCCACCATC AGATAGCGAT
AACGACGGTG TGGACGATTC AAGTGATCAA TGTCCAAATA CCCCTGCGGG TACCAGTGTA
AATGCAGTGG GTTGCCCTGT AACGCAAACT AATATTGTGC CTTTATATAA TGCCAGCACA
AACTTAGAAG GCGCTATTTC TTTTGATCGC GGTGATGCGC TTGTTACGCG AATTTCAGAT
CGCGGTCGCG ACCGTCACGC AAAAGAAAAC CACTTCCAAG CTTACGATCA CTACCTTACT
TTCTATTGGG AAGATCGCAC TATTGCTATT GAAATAGTGG ATTACGTTGC GAAAGGTGGC
AGCAGCATTC GCATGAATAT CGTAAGTCAA ATGCGTTTGG ATGACACCGA AGCAGAAAAC
CGCTGGTTTT ATATTGGTAA CAACACGCTC GCTGAATACT GTGGCAATGG CGTGATGAAC
GAAGTGGATC ACACGCACTA CTGGAAGGAA TCTAGCTTTA ACTGTCGTGA GGGTCGTCCC
ATTCAAATTG GCGATAAAAT GGAGTTTGAA ATCAGCCAAT TTTTAGACCC CGCGCTATTA
CCTCGCGGTC GCTCTAATTA TTACGGCACC ACTTACCTTT ACATTGTGGG TGAGGGCTTA
GTGCCTTGGG ATGTTACCGA TAAAGTTGCT TTCCAAGGCG GCAACCGTTT GCAGCGAGAT
TCCATTCCTG TGCCCGAGCA CGCGCGTTTA GGTGGCGATA CAACTTTGCA TGTGCAAATG
ACTGCCGAGC CAGATGGCCA CTTCCAGCAA ATGGCAACCA ACCTGGGTTT TGATAATGGC
CAGCCGTTTG TACTCGGTCG CCGTGTGCAC CACACATCTT ACGTAGATGG TACGCACGAT
GAGAGCGCAG AAAACGGCGT ATTTGATGGT ATGCCAGGTA AAGCAGGCCC GCACTATGTG
AATGACCGCT GCTCGGATTG TCACGAGCGC AATGGTCGTG CACCGGTTGT GGGTATTGGT
GAACCGTTAG ACCGTTGGGT GTTTAAAGTG GGCGACGCAA ATGGTAACCC GCATCCAGAT
ATGGGGCGCG TATTGCAGCC AGAAGCGAAC AACGGTGCCG CTAGCGAGGG CACGCCAACC
ATCGCATTCT TTAGCGAAGA AAACGGTTTG CGCAAACCAA ACTATGCATT TAGCGGCATA
ACGCCAGACA CTTTCTCTGC GCGTATTGCC CCACAGCTAA ATGGCATTGG TTTGCTCGAA
GCGATTCCAG AAAGTGCAAT TTTAGCGCAA GAAGATGTGA ACGATGCGAA CGGTGATGGT
ATCTCCGGTA AAGCGCAGCG CTCTATCGAC CCTGTAACCG GTGAAACCCG CTTAGGTCGC
TTTGGCTACA AAGCAGCAAC CAGCAGTGTA AAGCATCAAG TGGCTGCGGC GTTTAATACG
GATATAGGTG TACGTACCTC TGTAATGCCC AACCCAGATT GCGGCTCGAA TCAAAACGAT
TGTGGCCCAA GTGGTGCGGA ACTAGCAGAT GAGCATTTAG ATAACCTTGT TAAGTATGTT
TCTTTACTGG GTGTTCGCCC ACAGCGAGAC TACAACGATG CGCAAGTACT ACAGGGTAAG
CAAGTGTTTA ACGATGCTGG CTGTGTGAGT TGTCATACCG ACACTTACCA AACATCGCAA
TATCACCCGC TTGCAGAGTT ACGCAGCCAA ACTATTCACC CCTACACAGA TCTCTTGCTG
CACGATATGG GCCCAGGTTT GGCCGATAAC TTAGGTGAAG GCGATGCAAC GGGTGCCGAA
TGGCGTACCG CGCCGCTTTG GGGCTTAGGT TTGTCTGCTT GTGTTACGGG TGGTGTAGAA
GGTGGTCGCG GCTGGGATGA TTTTGGCTTA GATGGCTACG AAACCTGTAC TCCACATCAC
AGCTACTTAC ACGATGGTCG CGCACGCACC ATTGAAGAAG CTATTTTGTG GCACGGTGGC
GAAGGTGAAA ACTCGAAGCA AGCGTACCAA AACTTAAGCA ATAGCGAGCG CGATGCTCTA
CTCGCATTCT TAAATTCCCT CTAA
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| Protein sequence | MSNQKRLSAG LIAKLALASG LTLVATAATH ADVTNPVIGN LIFEENFNTL NSDRWNVIEG
DGCQYGPNLC GWGNQELQYY QDSNVTIEDV PGEPGNKAVV FEARNETVNG SAFTSGKIDS
EDGIAIKYGM IEFRLRVPNM GVGYWPAVWM LGTSTESWPS KGEIDMMEMG HRAQGMADAG
HPGTNLNNYT AANAIFYAEA ACVPENPTCA AMTAWQTDNA YVSQTSMGER FVIYRTYWTD
TQLRFTVIDN GVEYDMYDDP ITIGEEATEL QQPFYLLANL AVGGNFTDAS TPAEVTAQLP
GKMYLDYIRV YQLDGMGEIF EGSIAQKEYG TFGVFTDDTP TSNKLVAGDT SQIYIWNQNS
LSEGTLAPAE GDNVIAWNYT APEWFGAGIQ AVHARDMSNF ENGEFKFKIK IPANVSFKVG
FADTYTNENW LTFPANQTTY GLVRNGEWAE ATIPVADLRG SLIALQSMAG MFYIASVDGQ
IPTSNFEFAI DDVRWEGGGA GPVDSDGDGV ADELDQCPNT PAGTAVDSVG CQIGLPQPVA
VTVEAEDYEA YYDTTSGNSG NAYRSDDVDI EAASEGGFNV GWTDAGEWMD YTLNLAAGTY
DVTARVASNT DTGVYSVSLD GTTIGSNGVA TGGWQNWVTQ VVGQITVNGG QQTLRISTDV
AGYNINWVHF EPVPDADNDG VPDSQDNCPN TPAGTEVDAN GCAIVVDPVP VHIEAEDYAA
YHDLSAGNNG GQYRSDDVDI EAASEGGFNV GWTDTGEWLE YSVELIEGVY DLTARVASLS
GNGAYSVSIS GQAVGGSNAV ATGGWQNWET QHVARFVAGT GTYTIRVNAD AGGFNLNWLH
LEPVNDPDSD NDGVPDSQDN CANTPAGTEV DASGCPVVVQ PFGVTQSDSN SAQFYVNGAD
WAVLHYSVNG GGQVNVSMSL ENGKHVYTVP DLAPGDSISY FVTYWDPELG GARDSETVSY
SVVAAGSDSD GDGVGDSADQ CPNTPAGTAV DSVGCPVTQP PSDSDNDGVT DANDQCPNTP
AGTSVDSVGC PVVQPPSDSD NDGVDDSSDQ CPNTPAGTSV NAVGCPVTQT NIVPLYNAST
NLEGAISFDR GDALVTRISD RGRDRHAKEN HFQAYDHYLT FYWEDRTIAI EIVDYVAKGG
SSIRMNIVSQ MRLDDTEAEN RWFYIGNNTL AEYCGNGVMN EVDHTHYWKE SSFNCREGRP
IQIGDKMEFE ISQFLDPALL PRGRSNYYGT TYLYIVGEGL VPWDVTDKVA FQGGNRLQRD
SIPVPEHARL GGDTTLHVQM TAEPDGHFQQ MATNLGFDNG QPFVLGRRVH HTSYVDGTHD
ESAENGVFDG MPGKAGPHYV NDRCSDCHER NGRAPVVGIG EPLDRWVFKV GDANGNPHPD
MGRVLQPEAN NGAASEGTPT IAFFSEENGL RKPNYAFSGI TPDTFSARIA PQLNGIGLLE
AIPESAILAQ EDVNDANGDG ISGKAQRSID PVTGETRLGR FGYKAATSSV KHQVAAAFNT
DIGVRTSVMP NPDCGSNQND CGPSGAELAD EHLDNLVKYV SLLGVRPQRD YNDAQVLQGK
QVFNDAGCVS CHTDTYQTSQ YHPLAELRSQ TIHPYTDLLL HDMGPGLADN LGEGDATGAE
WRTAPLWGLG LSACVTGGVE GGRGWDDFGL DGYETCTPHH SYLHDGRART IEEAILWHGG
EGENSKQAYQ NLSNSERDAL LAFLNSL
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