| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1391 |
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| Symbol | |
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| ID | 3968660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1796779 |
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| End bp | 1797918 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637920467 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_526865 |
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| Protein GI | 90021038 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATC GAATTTTTAA TGTATACGAT GTTTTCTTGA TTATTGCAGT GTTTGAAGCA
TTGTTATTAG CTGTTTTTCG GATGGTGCTG CCGGCCAGCA ATCGCAGTGG TAAATGGGGT
AGTTATTTTC TCGCTGCTTT TTTAATCGTT GTTTCCGTCG ATTTCATCAC CGGCTTGCTA
ATGTGGAATG ACGCCATTCC CTTATCGCAA TCCTTTTACT CTAATGGTTT GGTGCTGCTA
TTTACATTCA GTCATTTTGC CCGTGGTCCG TTATTTTATT TTTATGTGCG AGCGTTGCTG
TTTTCTGGTT TGCAATTGCG AGCAAGGCAT TGCATTCACG CTTTACCGGC GTTGCTGGCT
GTTGTGGGTG TGTGTGTATT TGGTATTACT ACAGAAGACT TGCAGTCGCG ATCTGGCGAT
GTGGATACTA CCCAAATGGC GAGTGTTATC TGGTATGCGT CTAATGGTTT GTCCATTTTT
TACGCGGCGT ATGCGTTGGT GTGGCTGCAA AAATATTTAC AGCGTTTAAA AGAGCAGTTC
TCTAGTATTT CGAGCATAGA AATTAGTTGG TTAATGGTGC TTAGTGGCTG TTTTTTAATT
AGTTGGAGCT GGTCTATTTT AATAAACTTA AGTGCAGATC TAATTGGTGG TGGTTTTGCT
GATGCGATGG GCACCAGTCA CAATTTAATA CGTTTTATGC TAATGAACGG GCTGGTATTT
TATAGCTTGG TATGCACCAG TAAAATTGTG AATGTACGTT ATAGCGAGCC GAAGCAAATA
GCAGTAAAAG ACTCTAAAGA TGTGGTTGAA CAAATTGAGA GGGGTATCCA TGAGTTGCAG
TTACATTTGT ACCCAAGTAT CAATATTGAT CAATACGCCG AGAAAATAGG TGTAAATGCT
AAAGCAGTGT CTAACGCTTT AAATAGAGAC CTTAAAACAC GCTTTTTCGA GTTTATTAAC
GCGCATCGGG TAGAGGAGGC TAAGCGCCTG TTGGAGGATA GTAGTAAAAA AAATTTGTCC
ATTGCACAAA TTTATACTGC TGCAGGGTTC AATAATAAAT CGTCATTTCA TCGGTTTTTT
AGTCGTTTAG TGGGTATGTC GCCTTCAGAG TATCGGCAAC AAGCACAGCG CGGTAAATAA
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| Protein sequence | MGDRIFNVYD VFLIIAVFEA LLLAVFRMVL PASNRSGKWG SYFLAAFLIV VSVDFITGLL
MWNDAIPLSQ SFYSNGLVLL FTFSHFARGP LFYFYVRALL FSGLQLRARH CIHALPALLA
VVGVCVFGIT TEDLQSRSGD VDTTQMASVI WYASNGLSIF YAAYALVWLQ KYLQRLKEQF
SSISSIEISW LMVLSGCFLI SWSWSILINL SADLIGGGFA DAMGTSHNLI RFMLMNGLVF
YSLVCTSKIV NVRYSEPKQI AVKDSKDVVE QIERGIHELQ LHLYPSINID QYAEKIGVNA
KAVSNALNRD LKTRFFEFIN AHRVEEAKRL LEDSSKKNLS IAQIYTAAGF NNKSSFHRFF
SRLVGMSPSE YRQQAQRGK
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