| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1386 |
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| Symbol | |
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| ID | 3968655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1790611 |
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| End bp | 1793751 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920462 |
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| Product | hypothetical protein |
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| Protein accession | YP_526860 |
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| Protein GI | 90021033 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000408374 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC TTAACTCATT TATCTTTCAG AGTGTAAAGC CCATGCTTAA CAAAAATATT
AGCTCTCTGA TGTTGGCCGG AGTCATCGCG CCACTATTCT CAATATCCGC TTTTGCGCAG
GATAAAGACA ACGTAATGCT GGAAGAGGTT GTGGTAACTG CTACGCGTCA AGCATTGCAA
GATGCGTTAA CGCTAAAGCG CGAAACGACT AGCATTTCCG ATGTGCTGGC AAGTGGTGAT
ATTGGTGAAA TTCCGAGTCT TTCAGTGGCC GAAGCGTTAG AAGCAATCCC TGGTGCTACA
ACTCACCGCT TGAAAGGTAG CGGCTCGCAG GTGTCTTTGC GCGGCCTAGG CCCAACGTTA
GGTTTGGAGA CATTTAATGG TCGTACTGTA ACCACCGGTT CAGAAAACCG CAGCGTTAAC
TTCCAGCAGT TCCCGTCGGA GCTAATGGAT AAAATTCAAA TTTATAAATC CCAGTCTGCC
GATATGATCG AAGGCGGCAC TTCTGGAGTG GTTGAGCTTA AAACGGTTCG CCCGTTAGAT
TACGGAAAAA ACGTAACGGT TGTGGATGTG CGTGGCAAGT TTAACTCTTA CGCCGCCCGC
CAAGATGAAA ACGATGGTTT TGGCTATCGT GGCTCGGCGT CTCATATTAA CCAATTCGAA
ACAGATTTTG GTCCAGTGGG TGTGTCTGTT GGTGTTGCGC TTTATGATCA CGGCAACCCA
GAAGAATCTT ACAACCCAAG TTCTTCTACA ACCGCGTGTG TAAACCAAGG CTGGACCTCT
CAAGAGGCGA TGTTGGCTGC TCGCTCAACA AGCTTTAAAG AAGATTGCGC CCCAACTACC
CCTGCAGGCG CTCGTGGTAC AGCATACACA GATGCCACCG GCGTACTGGC AAGCGGTGCC
GACCTAAATG ACGTGTACAT AGTGAATAAC TCTGGTGCAT ACCGCAATTT AAATGACAAT
GAAAATCGTC GTGCGTTTAT GGGAGCGGTG CAATGGCATC CAAGCGACGA TTGGGAATTT
AATGTCGATT TGCAGTTGTC GAGTAAATCC TATGAAGAAG CGCGTTCAGA AATTCAAGCA
GATAACATGC GTCGCGGTCA CTACGATGTA GTGTTAGACC CAAATAGCTA TAACGCGTTA
TCGTGGAAAG GTACGTCTCA AGTTCGTTTA GATAACAACA TGTATCGTCG CGTAGAAGAT
TACGTGGGCG GTGGCTTTGC AGTTACTTTT ACCCCAACTG ATCGCTTAAC GCTAGATGCA
GATCTATCGT ACTCGGATAC TCATCGTTCA CGTAATCAGC GTTATGTTCG TTTCCGCACT
TCCGATTACA TCGATTACAG CTTCGTAAAT GCTTCCGATA CGCCAGAGCT TACCTTTGGT
GGTAACGTTG AAGGCGGTGT GGAATTTGAT CCAACGGATT TGTCTTCATT TGATTTAGGC
GCAACTATTC GCAGCCGTAA GTTTGATCAA AAACACACTA TGGAAGCAAT TCGTTTAGAT
GCTGATTACG CAATGGAAGA AGGTGGCTTT ATTACGTCTT ACGAGACCGG CATTCGCTAC
TCTACCAACA AGCGTGTGGT AGAAGCGGAC GATAGCCAAG AAACGGGTAT CGAAGTGATT
TATGCACTTT ACACCGATGG CGATATGGCA AACCCAGCAG TTTCCAACAC CGAGTTGCGC
GGCCGTATAG CGCAGGAATG TGGTATCGAT TTTCCAAATG ATAATTTTGG TGCGGGTACC
AACGCGGCTA AATCTGCGCC TTGGGCAAGC TTCGATACAG AATGTGCAAT TAGTTTAGTT
ACCAACGGTA AAGCGACCGA AGGTATTACC CATGAACAAG CATTGGCTGC AGCAGGCATG
AGCGATGTAT TGGGTGACGA TATTAATGTA AGCGAAACCG TAACCGCTGC GTACATAAAA
GCAAATTACA GTACCGAGTT GGGCAGTATT CCTGTGTATG GTAATTTCGG TGTGCGAGTG
CTTGAAACTA CGGTTGAATC CATAGGCTAT AAAGTAGGTT ATACCGCAGT TTCTTGTAAC
CCAGACGACG CAGGTGTTTC TTACAGTGCC GATTTGTGTG GCTTTACTGA AGATGCCAGC
GGCGACGATT GGTACCTAAA GCGCGATGGC CGAGTAGAAA CCTTAACCGA TACCAATAGC
ATTACCTCAT TCTTGCCAAG CGTTACGGCT ATATTTGATA TTAGCGATGA GTTTTTAATT
CGCTCGGCAA TTTACCGCGC TTTAAGCCGC GAAAATATTG ATTGGTATGC GAATGGGTAT
TCTTACGGCG AAGACGAATT CGACGATAGA AATGGCGTAA GCGGCGTATT AACAGATGAT
ATTCGCAGTG CATCTACCGG TAACCCCTAC CTTAAGCCAT ATATGTCGTG GAACGCAGAT
GTATCGTTCG AGTGGTACTT TAGCCCTGAA TCTTCGATAA GTACTGCGTT TTACTACAAA
GATTTCGAAG CTACTTACGC GAATGAACGC GTAGAAACCA CCCAAACCGT GGGTGTGTTT
GGCGGTGATG AAAGTTTAGG TGCTGGTACT GCTGCGCCTG GTGAGATTGT TTACTACGAG
CAAGATGTAG CGGTAACTAA ATTCGTAAAC GTGGATCAAA ACAACTCGTT GTATGGTTTA
GAGTTAAACG CGCAAACCGT ATTTACTATG TTGCCTTCAC CATTTGACGG GCTAGGTACT
CGCTTAACTT ACAACTACGC ACAAACAGAT TACGTTACCC AAGATGCTGT ATGGGGCGAT
GCTGTAGATG AAGATGGCAA TGTAATAGTA GGTTTACCTA ACCTGGATGA AGCTAGCTTC
TTTGGTCAAT CTGATCACAG TGGATCGCTA ACCGTATTCT GGGATATAGG TGACTTGAAC
CTACAGTGGA TTACCAAGTA CCGCAGCGAA TACTTGCAGC CTAACTTAGG TATTGCAGCA
GGTAACCGTT GGATTGCACC GTTTACGTTA ATGGATTTCG CTGCTAGTTA TAAAATTAAC
AAAACATTCA AAGTACGTGC AACAGTTCAA AACGCCTTTG ACGAGCCTCA AGTGGGTAAC
CGTGTTTCTA AAACAGGTAA CTCAACCTTG TGGTCTGCTA CTGGTCCTAA ATTTGAACTG
GGCGTAACGG CTAAGTTTTA A
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| Protein sequence | MNKLNSFIFQ SVKPMLNKNI SSLMLAGVIA PLFSISAFAQ DKDNVMLEEV VVTATRQALQ
DALTLKRETT SISDVLASGD IGEIPSLSVA EALEAIPGAT THRLKGSGSQ VSLRGLGPTL
GLETFNGRTV TTGSENRSVN FQQFPSELMD KIQIYKSQSA DMIEGGTSGV VELKTVRPLD
YGKNVTVVDV RGKFNSYAAR QDENDGFGYR GSASHINQFE TDFGPVGVSV GVALYDHGNP
EESYNPSSST TACVNQGWTS QEAMLAARST SFKEDCAPTT PAGARGTAYT DATGVLASGA
DLNDVYIVNN SGAYRNLNDN ENRRAFMGAV QWHPSDDWEF NVDLQLSSKS YEEARSEIQA
DNMRRGHYDV VLDPNSYNAL SWKGTSQVRL DNNMYRRVED YVGGGFAVTF TPTDRLTLDA
DLSYSDTHRS RNQRYVRFRT SDYIDYSFVN ASDTPELTFG GNVEGGVEFD PTDLSSFDLG
ATIRSRKFDQ KHTMEAIRLD ADYAMEEGGF ITSYETGIRY STNKRVVEAD DSQETGIEVI
YALYTDGDMA NPAVSNTELR GRIAQECGID FPNDNFGAGT NAAKSAPWAS FDTECAISLV
TNGKATEGIT HEQALAAAGM SDVLGDDINV SETVTAAYIK ANYSTELGSI PVYGNFGVRV
LETTVESIGY KVGYTAVSCN PDDAGVSYSA DLCGFTEDAS GDDWYLKRDG RVETLTDTNS
ITSFLPSVTA IFDISDEFLI RSAIYRALSR ENIDWYANGY SYGEDEFDDR NGVSGVLTDD
IRSASTGNPY LKPYMSWNAD VSFEWYFSPE SSISTAFYYK DFEATYANER VETTQTVGVF
GGDESLGAGT AAPGEIVYYE QDVAVTKFVN VDQNNSLYGL ELNAQTVFTM LPSPFDGLGT
RLTYNYAQTD YVTQDAVWGD AVDEDGNVIV GLPNLDEASF FGQSDHSGSL TVFWDIGDLN
LQWITKYRSE YLQPNLGIAA GNRWIAPFTL MDFAASYKIN KTFKVRATVQ NAFDEPQVGN
RVSKTGNSTL WSATGPKFEL GVTAKF
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