| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1314 |
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| Symbol | |
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| ID | 3966085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1704772 |
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| End bp | 1705446 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920390 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_526788 |
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| Protein GI | 90020961 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.6037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.969851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCAGAAA CAAACGATAG AAAAGCAGAT AGATACCACC ACGGTAATCT TAAAACCGCA
CTAGTTGATG GTTTTTTAGA AATGCTGCCC TCTACCACTA TAGAGAGCAT TTCGCTGCGC
AAACTGGCAA CCCATATTGG CGTTGCAGCC ACAGCCGTAT ACAACCACTT TAGCAATAAG
GATGAATTGT GCGCAGCCGT TAAGTTGCGC TGCTTAGACC ATTTCGCTCA ATGGCTAGAA
AGCCATGTAG AGAAAAATGC AGAGCCAGAA GAACGAATTT ACGCACTTAG TAAAGCCTAT
TTTCAATACT CTTTGCAACA CCCACAGTAC TTTCAGTTTA TTTTTCAAAT TGATATACCG
CAGGAATACG TAACAGCAGA GCTAATTGAA ACGTCAATGC GCGCAGAACA AGAGTTGCGC
AACTCTGTTA TAGCCTTGCT AGAAAAACAC CAACTACCTA CCACCCAGTA CAACGAAGGT
TTAGGGGCGT TTGCTTGCTG GTCCCTCGCA CACGGCGTAA CCACCTTGGC AGCAAAGCAT
GTAAATCACG CGGCTTGTTT AAGTGGCCGC TGGCCGCCGG AATTCATGCT AGATAACAAA
GAATCCATTA ACGCCGCTTT CGAGCCGCTC TCTAAAGTGG TTATTGCTGG TATTCTAGCC
GTAGCGAAAA AATAA
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| Protein sequence | MAETNDRKAD RYHHGNLKTA LVDGFLEMLP STTIESISLR KLATHIGVAA TAVYNHFSNK
DELCAAVKLR CLDHFAQWLE SHVEKNAEPE ERIYALSKAY FQYSLQHPQY FQFIFQIDIP
QEYVTAELIE TSMRAEQELR NSVIALLEKH QLPTTQYNEG LGAFACWSLA HGVTTLAAKH
VNHAACLSGR WPPEFMLDNK ESINAAFEPL SKVVIAGILA VAKK
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