Gene Sde_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1313 
Symbol 
ID3966084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1704205 
End bp1704696 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content42% 
IMG OID637920389 
Productputative acetyltransferase 
Protein accessionYP_526787 
Protein GI90020960 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.338207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.391581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG AGAATAAGAA AATAATATGT GTTGATTACC ACAACGATAC GCATACGGAA 
GATTTATTGG CTATGCTAAA TGAATATGCT TCATCTTTAG AGGGCGGCGC GGCGCCACTA
TCGCCAGCTA CGCGTAACAA CTTAATTCCC GCTCTGCGAG AGCGCAGTGA TGCAGTAAGT
TTACTGTGTT ACGTTGATAA CAAACCGGTA GGTATTTTAA ATGCCTTCGA AGGGTTTTCT
ACGTTTAACG CAAAACCATT AATGAATGTG CATGATCTTG CCGTAAGTGA AGCTGTGCGA
GGGCAGGGTA TAGCAGGCAT GTTGTTAGAT GCCTTAGCAA AAATAGCTGA GCAAAAAAAT
TGCTGCAAAC TAACGCTCGA AGTTCTAAGT AATAATACGC CGGCCATTAA GTGCTACCAG
AACAATGGTT TTAAGCAATA TGTATTGGCC GGTGCAATGG GAGTGGCGCA GTTCTGGCAA
AAGAATATTT AG
 
Protein sequence
MKTENKKIIC VDYHNDTHTE DLLAMLNEYA SSLEGGAAPL SPATRNNLIP ALRERSDAVS 
LLCYVDNKPV GILNAFEGFS TFNAKPLMNV HDLAVSEAVR GQGIAGMLLD ALAKIAEQKN
CCKLTLEVLS NNTPAIKCYQ NNGFKQYVLA GAMGVAQFWQ KNI