| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1273 |
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| Symbol | |
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| ID | 3965255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1631473 |
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| End bp | 1632666 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920347 |
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| Product | mannonate dehydratase |
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| Protein accession | YP_526747 |
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| Protein GI | 90020920 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1312] D-mannonate dehydratase |
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| TIGRFAM ID | [TIGR00695] mannonate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00133457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.256555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAA CTTGGCGTTG GTTTGGCCCA AACGATTCAA TTTCTCTTCA AAAAATAGCC
CAAGCCGGTG CCACAGGCAT TGTTAGCTCG TTGCATCACG TTCCTACTGG CGCGCTTTGG
CAACTTGAAG AAATAGAAGC ACAGAAAAAA ATCATTGAAG ATGCTGGCTT AGAATGGTCA
GTAATTGAAA GCATTCCTGT GCACAACGAT ATAAAAACTC GTACCGGTAA TTTTCAGGAA
TATATCGAAA ATTATAAGCA GTCCGTTATT AACGCCGGTA AAGCAGGCGT TAAAACTATT
TGCTATAACT TTATGCCGGT TGTGGATTGG ACCCGCACCA ATCTTTCTTA CCGCCTACCT
AACGCGAGCC AAGCGCTGCG TTTTGAAATG ACTGATTTTG CCGCCTACGA CGTTTACCTT
TTACAACGCG AGAATGCTGC GGCAGATTAC TCTGAAGAAG TATTAAACCG TGCAAAAGCC
CGGTTTGACG CAATGGACGA GACCGAAAAG GACCTATTGG AAAAAAACAT TATTGCGGGT
TTACCCGGTG GTGAAGGCTC TTATACACGC GACACAATCA GAGAGGCCAT TCAACAATTT
ATTGATTTAG GCACCGAAGG TTTTCGCAAT CATATGTTCG AGTTTTTACG CGAAATTATT
CCTGCGGCAG AAAGTGTGGG TGTAAAAATG TGTATCCACC CAGATGATCC ACCCTTTTCT
CTATTTGGGT TGCCTCGTGT TGTTTCAACA GCAGACGATG CTCGCAAGCT ATTAAATGCT
GTACCTAGCC CATCTAACGG GTTAACACTT TGTGCCGGTT CCTACGGAGC TAGAGGCGAT
AACGATTTAG TTGGTATGGC AAAAGAATTT GGCGACCGAA TTTACTTTGT ACATTTGCGT
AACGTTAAGC GCGAACCAGA TGGTTCGTTT TACGAAGCTG ATCACCTAGA TGGCGATAAC
GATATGGTTG GCCTGGTCAA CGCCTTGCTA TGCGAAGAAC GCAGACGCCA TGCCGCGGGC
GAAACGAATT GCGCAATCCC TATGCGCCCG GACCACGGCC ACCTAATGGC TGACGAGCTT
AACCTACCCG ACGTAAAACC CGGTTACTCG TACACTGGGC GCATGAAAGG ACTGGCTGAG
TTACGCGGCG TTATCCATGC GCTAGAAGTG TTGCAACGCC AGCATGCGCT TTAG
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| Protein sequence | MQETWRWFGP NDSISLQKIA QAGATGIVSS LHHVPTGALW QLEEIEAQKK IIEDAGLEWS
VIESIPVHND IKTRTGNFQE YIENYKQSVI NAGKAGVKTI CYNFMPVVDW TRTNLSYRLP
NASQALRFEM TDFAAYDVYL LQRENAAADY SEEVLNRAKA RFDAMDETEK DLLEKNIIAG
LPGGEGSYTR DTIREAIQQF IDLGTEGFRN HMFEFLREII PAAESVGVKM CIHPDDPPFS
LFGLPRVVST ADDARKLLNA VPSPSNGLTL CAGSYGARGD NDLVGMAKEF GDRIYFVHLR
NVKREPDGSF YEADHLDGDN DMVGLVNALL CEERRRHAAG ETNCAIPMRP DHGHLMADEL
NLPDVKPGYS YTGRMKGLAE LRGVIHALEV LQRQHAL
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