| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1242 |
|---|
| Symbol | |
|---|
| ID | 3968203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1592876 |
|---|
| End bp | 1593313 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637920316 |
|---|
| Product | globin family protein |
|---|
| Protein accession | YP_526716 |
|---|
| Protein GI | 90020889 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2346] Truncated hemoglobins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.954597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGCG CGATTAGAAC CGTATCTATT GGAATGATTG CAACCCTATT GTTACTGGGG
TGCAGTAGTT TGCAGGGGCA AAACCAGACT CTTTATAAGC AGTTGGGTGG GCAAGATGGA
GTTTCTGCGC TTACTAGGCA ATTGCTAATT AATATGGCCG CAGATAATCG CATAGCCCCT
AGGTTCCGCG GGGTGAATAT AGGCAAGTTT AAAACAGGGT TAGATACCTA CCTGTGTAGC
ATTACCGATG GTGGCTGTGT GTATGGTGGT GACAGCATCA AAACTATTCA CTCTGGCTAC
AATTACACTG CAACAGAGTT TAACGCGCTT GTTGAAAACC TCATGCAAGC CATGGAAACG
CTGCAGATCC CTACGGCAAC CCAAAACAAG CTGCTGGCCA AATTGGCGCC AAGCTACCAA
GATGTGGTTT ATCAGTAG
|
|---|
| Protein sequence | MFSAIRTVSI GMIATLLLLG CSSLQGQNQT LYKQLGGQDG VSALTRQLLI NMAADNRIAP
RFRGVNIGKF KTGLDTYLCS ITDGGCVYGG DSIKTIHSGY NYTATEFNAL VENLMQAMET
LQIPTATQNK LLAKLAPSYQ DVVYQ
|
|---|
| |