| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1220 |
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| Symbol | |
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| ID | 3968005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1567375 |
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| End bp | 1568157 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920294 |
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| Product | sigma-70 factor |
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| Protein accession | YP_526694 |
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| Protein GI | 90020867 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0178676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACA TTCTAATTAC TCGAATACTT GCGTGCGTTT TTATGCTGGC GTCGGTGGCC
GCTAGTGCTG AGCAATTTAA AGTGTTGCTG TTTACTAAGA CCGATGGTTG GCATCACAAG
TCTATTAATG CCGGCGTAAC AGCAATGGAA ACCTTGGCCA AAAAGCACCA CTTTTTAGTG
GATTGGCACG AGGATGCTGG CCGTATTAAT GACGATAACC TTAAGCAATA CGACGCCATT
GTATTTTTGC TCACCACTGG CAATATTTTA AACGAAGAGC AGCAGGGTGC CATGGAGCGC
TTTATTCAAT CTGGTAAGGG CTTTGTAGGT ATTCACAGCG CATCCGACAC CGAATATGAG
TGGGATTGGT ACACTAAAAT GGTTGGTCGC ACGTTTCATA TCCACCCCGA AATTCAAACC
GGTGAGTTAC AGGTGCTCGA TCGCAAGTTT CCTGGCTTAG AGCGTATGCC AGATCGCTTA
TTGTGGACCG AAGAATGGTA TGAGTTTGGC GCAGAGCGTA TAGATGGTTT GAACTATATT
TTGGCGGTAG ACGAAAAAAC CTATGACCCC GAAGCCGACT GGGGCCGTGT AGCTGGCAAG
GGTATGGGTA AGTTTCACCC TATAGCGTGG TACCACGAGT ATGACGGCGG TCGCGCATTT
TATACCGCGC TTGGCCATAT GGGCTCTACC TATAGCGACC CTCTATTTAT GGAGCATATC
TACGGCGGCT TGTACTGGGC CGTGACGGGT AAAGGCATTA AGAAACAAGC TACAAGCAAC
TAA
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| Protein sequence | MNHILITRIL ACVFMLASVA ASAEQFKVLL FTKTDGWHHK SINAGVTAME TLAKKHHFLV
DWHEDAGRIN DDNLKQYDAI VFLLTTGNIL NEEQQGAMER FIQSGKGFVG IHSASDTEYE
WDWYTKMVGR TFHIHPEIQT GELQVLDRKF PGLERMPDRL LWTEEWYEFG AERIDGLNYI
LAVDEKTYDP EADWGRVAGK GMGKFHPIAW YHEYDGGRAF YTALGHMGST YSDPLFMEHI
YGGLYWAVTG KGIKKQATSN
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