Gene Sde_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1195 
Symbol 
ID3967864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1541491 
End bp1542282 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content47% 
IMG OID637920269 
Producthypothetical protein 
Protein accessionYP_526669 
Protein GI90020842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCACAA TAAGTTGGTT ATACGATCAT AACGGCTACC ACATTTTCTT TAATAGAGAT 
GAGCAGCGTA CACGAGAGAA AGCGCAGCAG CCAAAGGTGC ATAATGTAGC GGGGTGCAAA
GCAATTTATC CTGTGGATGC TAAAGCGGGT GGAACTTGGA TTGCGGCAAA CGAATACGGG
TTAACATTTG CGCTGTTGAA CTATTATCAG GCACCTATAG ATACCGATGC AAAACATTCG
CGTGGGTTGA TAATTCCTTC GCTGTTACCT GCTAAAAACG TTGCCGAAGC GCACGATATA
TTAAAGCGTG TTAATTTGAA GGGGTTTGGT CCGTTTAGCT TGTTATGTTT TTCACCGCAG
GCTGCGGGCG GTGAAAAGTT TTCCGATGCG AATCGGCGTG TGCCTCTATT GCGTTGGAAT
GGCATTAAGC TAGAAAAGGT CATGCAGGCT AGCCCGCTTA TTTCGTCTGC GGTTGATTAC
GAGAACGTCA ACGCTGTGCG CAGTGAGTTG TATAGAAATA TTTTTCGTGA AAAAACGGCA
TTACAGCCGA TGGATTTCTA TCGCTACCAT GCCACCCACA CACCTGCGAG GGGTCACTTA
TCTGTTTGTA TGCATCGAGA AGATGCGCGC ACAGTCAGTT TTTCTCATGT GGCGGTAGGG
CATCACGTAG TTGCTTTTAC TTATCTAGAT AGCGCGCCGT GTTGCAGCGT CAGTGATGGT
GTAGAACAGG GTAGAAACCT AAATACAGCC ACGCTTATAC GCAAAGCTGT AACCGAGACC
AGCTTTGCGT AG
 
Protein sequence
MCTISWLYDH NGYHIFFNRD EQRTREKAQQ PKVHNVAGCK AIYPVDAKAG GTWIAANEYG 
LTFALLNYYQ APIDTDAKHS RGLIIPSLLP AKNVAEAHDI LKRVNLKGFG PFSLLCFSPQ
AAGGEKFSDA NRRVPLLRWN GIKLEKVMQA SPLISSAVDY ENVNAVRSEL YRNIFREKTA
LQPMDFYRYH ATHTPARGHL SVCMHREDAR TVSFSHVAVG HHVVAFTYLD SAPCCSVSDG
VEQGRNLNTA TLIRKAVTET SFA