| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1183 |
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| Symbol | |
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| ID | 3968622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1526583 |
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| End bp | 1529711 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920257 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_526657 |
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| Protein GI | 90020830 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.975079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.154806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TATTCAAGAT TTCAGCGCTC TCGCTAGGTT TCTCAATTGC TGGCGCTGCA
TCTGCAGCTG ATTTGTGCAA TGTAACCTAC GAAGCGGTAA ATAGCTGGGG CTCCGGTGCC
CAGCAAGCGG TAACCGTTGT AAATAACGGC CCTGCTTTAA ATGCCTGGCA GTTAAGCTGG
ACATTTAACG GCAGCGAAAA TATAGACAAC CTATGGGATG GCGTGCTTTC GCAAACTGGT
GCGAATGTTA CCGTTAACAA TGCTGGCTAT AACGGCAGTG TTGGTACTGG CGGTCAATTT
AGCTTCGGTT TTACCGTAAG CGGTTGGAGC GAAAACTTTC CCACAGAGTT TTACCTAAAT
GGTGAAGCGT GTAGTGGAGC TGTTGACCCT AATCCCAATC CTAACCCAGA GCCAACTGAT
GGCGCTGTGT GGGAGTTAAA CTCAGCCGAT TCAGTGTTTA GCTTTGTAAC TGTTAAAAAA
GAGCACGTTG CCGAAGTTCA AACGTTTACT GCCTACAACG CAACAGTTGA TAGCGATGGC
GTTGCAACGC TTGCTATAGA CTTAAACAGT GCAGAAACGA ACATTGATAT ACGCAACGAG
CGCTTCCGCA ATGTATTGTT TGAAACAGCT TTCCTTCCTA CTCTGTACTA CAGTGTTCAG
CTAGATATGG CTTCACTGTC TGCATTGGCG GTTGGCGATG CTCAAACGCA AACGCTTGGT
GGCACGCTAA CACTACACGG TGTACAAGCA GTGGTTGAGG CTGAAGTGTT GGTTGTTAAA
ACTAGCGCTA CCGACTTAAC CGTATCAACG TCTAAGCCTA TTTTAATTAA GGCTGCCGAT
TTTGATTTGG TAAGCGGTGT AGAGTCTTTG CGAGCCTTGG CTAGTCTTTC AAGTATTGGT
CAGACGGTAC CTGTTTACTT CCGTTTAGAC TTCGATGCTG CAGACCCGCA AGTAACTAAT
GCGGTTGCTG TTCCTGCTAC TCCTGCGGCG CCAACGTCTC TAACTGCAGA CTTCACAGAA
AGCAGTGGTA TTGCCGCGTT GAACTGGAAT GATGCAAGCA ATAACGAAAC CGAGTTTTTG
GTTCGTCGTC GTGAAGCGTC AACCGGTTAC TGGTCAAGAC TGACCGAAGT TAACGCGAAC
AGTACTTTGT TAGATGATCT TCTGTTAGAA GAAGACACCT ACGACTACAA AGTGATTGCA
TTGAACAACG GTGTGCCTTC TGCGCCATCG CCAGTTGCAA CTGTTGTAGC TACTACCAAC
CCTAACCCAG AACCATTGAC TGGCGAAGAG CACTATCAAG CTAAGTGCGC AAGCTGTCAC
GGTGATGACG CTAGCGGTGG TGTAGTTGGT GTTGCTTTGA ATACTGAGCG CGATTTAACC
GTTATGCTGA ACACCATTGT TACTCGCATG CCTCCAGGCG AAGCGGATAA CTGTGATCAA
GAGTGTGCGG AAGCAATTGG TGGTTATATT CAAACTACTT TCTGGAACGG CGGTGAGCCA
GAGCCAGAAT TAGCTTGTGA CACTGTTACT TACGGTGCTC GTCAGTTGAA GCTACTTACC
AAAGCTGAGT ATCAACGTTC TGTTGAAGAC TTAGTTGGTA TTGATTACAA CGTAGCAAGC
GGCTTAGCAG AAGATAACAT TATTGGTTAC TTCGTTAATA ACACCACCAA AGTGGTTGTG
CCAACGGTTT ACGATCAGTA TCTCACAGTA GCTGAAGAAA TCGCGCAGTG GTCTGCTGAC
AGAAACTTTG CGGGTGCATT AACTTGTGGC ACTAACTTTA ACCAAACCTG TGCGAATCAG
TTTGTTAACA ACTTCGCTCC AAAAGTATTC CGACGCGCGC TTTCTAGCGA TGAAGCTGCG
GCTTACTTGG CGATTGCTAA CGGCAGCGCT ACCAACGGTG ATGTTAAAGC GGGTATTCAA
CTTGCGATGG AAGGCTTGTT CTCTTCTCCG CAATTTGTAT ATAGACACGA GCTTGGTGAA
GCCAATCCAA ATAACAATGC TATCGACTCT GACGCGTTTG AATTAACGTC TTATGAAATG
GCTACTTGGT TGTCTTACAC TTATGCCGGT ACCACACCAG ATGCAATTGC TATGCAAAAA
GCTGCAAACA ATCAGTTGCG CACAGACGCG GAAATTCGCG CCGAAGCTCA ACGTTTGTTA
GAAGGTGCTG GTGCGAAGCA AAAAATGGGT GACTTCGTTG CTAGCTGGTT AGGTACTGAC
CACATTGCAA ACGCACCTAA AGATGCTTCT GTATGGCCTG GTTTTGATGC GTTAATTCCG
CATTTACAAA CTGAAATACG CGAAATGTTC TCGTACGTAA TGTTAGAGCC AACTGAAAGC
TTTGCTTCGG TTTACAACGC TAACTATACC TTCGTGAACG GACCATTGGC GCAACACTAC
GGCATTAACG GTGTAAGCGG TAATGAATTC CAAAAAGTAA CAACTACCGA TCGCGGTGGC
ATTTTGGCGA ACGGTGCGTT TATGGCGCGC TGGGGTGAAA GTGTAGAGTC TTCACCAATT
CGTCGTTCTG TGCGCGTACG CCGTCGTATG CTTTGTCAGG ATCAACCAGA TCCCCCTGGC
AACGTAAACA TCGGTCGTGA AAACGCTGCA GACGAATTCC ACGAGGCGTT GGCAGATCCT
ACTACGACTA ACCGTGAGCG TTATGAGCTG TTAACATCAG GTGAAACTTG TGCTACTTGT
CACCAAGAGT GGATTAACCC TCTCGGCTTT GGTATGGAAG ATTTCACTGC GGTTGGTACG
CGTCGTGTGA CGGATCTAAA TGGCAATACT ATTGATGCAA GCGGTCAATT GTACGCGCCA
GAAAACCTCA ACGATAAAGA CGTCTTTATT AACTTTAACG GTACTCAAGG TTTAGGTGCG
TTACTGACTA CCTTGCCAAG TGCGCAGTCT TGTTTGCCAC AAAACTTGTT CCGTTATTCC
GTGGGCGTTG GTGTAGAAGG GTTGGATGAT AATCCAGAAG GCAACGAGCT AGTTCCTGCA
GAACGGGATG GCTATGCCTG TGAAGTTAAA AACCTGACGA GCACTATGTT AGAGCAAAGT
CCGCGAGCAA TGCTGGAAGG CATGGGTTCC ATGCAAGCGG TACGTTACCG CAAAGCGTGG
GCGCGTTAA
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| Protein sequence | MKKIFKISAL SLGFSIAGAA SAADLCNVTY EAVNSWGSGA QQAVTVVNNG PALNAWQLSW
TFNGSENIDN LWDGVLSQTG ANVTVNNAGY NGSVGTGGQF SFGFTVSGWS ENFPTEFYLN
GEACSGAVDP NPNPNPEPTD GAVWELNSAD SVFSFVTVKK EHVAEVQTFT AYNATVDSDG
VATLAIDLNS AETNIDIRNE RFRNVLFETA FLPTLYYSVQ LDMASLSALA VGDAQTQTLG
GTLTLHGVQA VVEAEVLVVK TSATDLTVST SKPILIKAAD FDLVSGVESL RALASLSSIG
QTVPVYFRLD FDAADPQVTN AVAVPATPAA PTSLTADFTE SSGIAALNWN DASNNETEFL
VRRREASTGY WSRLTEVNAN STLLDDLLLE EDTYDYKVIA LNNGVPSAPS PVATVVATTN
PNPEPLTGEE HYQAKCASCH GDDASGGVVG VALNTERDLT VMLNTIVTRM PPGEADNCDQ
ECAEAIGGYI QTTFWNGGEP EPELACDTVT YGARQLKLLT KAEYQRSVED LVGIDYNVAS
GLAEDNIIGY FVNNTTKVVV PTVYDQYLTV AEEIAQWSAD RNFAGALTCG TNFNQTCANQ
FVNNFAPKVF RRALSSDEAA AYLAIANGSA TNGDVKAGIQ LAMEGLFSSP QFVYRHELGE
ANPNNNAIDS DAFELTSYEM ATWLSYTYAG TTPDAIAMQK AANNQLRTDA EIRAEAQRLL
EGAGAKQKMG DFVASWLGTD HIANAPKDAS VWPGFDALIP HLQTEIREMF SYVMLEPTES
FASVYNANYT FVNGPLAQHY GINGVSGNEF QKVTTTDRGG ILANGAFMAR WGESVESSPI
RRSVRVRRRM LCQDQPDPPG NVNIGRENAA DEFHEALADP TTTNRERYEL LTSGETCATC
HQEWINPLGF GMEDFTAVGT RRVTDLNGNT IDASGQLYAP ENLNDKDVFI NFNGTQGLGA
LLTTLPSAQS CLPQNLFRYS VGVGVEGLDD NPEGNELVPA ERDGYACEVK NLTSTMLEQS
PRAMLEGMGS MQAVRYRKAW AR
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