| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1182 |
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| Symbol | |
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| ID | 3968621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1525439 |
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| End bp | 1526554 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920256 |
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| Product | hypothetical protein |
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| Protein accession | YP_526656 |
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| Protein GI | 90020829 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.104267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGAAGCA GTTTTCTCAC CTGTTATAAA CCTAGCAAAG AGGTAATAAC CGTGAAGCGA
GCAGCAATAA ACTTGGTGCT GATACCCGGG CTAGCCGTAA GTATGGGGAC GTTGTCGTCT
TCTGCTTTTG CACAAAGCAC TTGTAGTGTG GACTATCGAG TAGAGTCCGA CTGGGGTGCA
GGGGCTACGC ACAAAGTATT AGTTACTAAC ACTGGAGCCC CCATAAACGG GTGGCAAATG
TCATGGACTT TTTCTGGCAA CGAGCAAATC ACTAACCTTT GGAATGGCAT GTTCACCCAA
AGCTCTCAAA GTGTGATTGT TGATAGTCTG TCGTGGAATG CCCAGCTAAA TACCGGTGCC
ACCGCAGAAG TGGGGTTTAA TATTAACTCT CCTTCAGGGC AGTTGCCGGA TGTGTATTTG
AACGGCGTAA ATTGTAGTAA CCCTGGTGAG CCAGAGCCAG AGCCAGAGCC AGAGCCAGAG
CCAGAGCCAG AGCCAGAGCC AGAGCCAGAA CCTGAGCCTG AGCCAGAACC TGAGCCAGAA
CCTGAGCCAG AACCTGAGCC AGAACCTGAG CCAGAGCCAG AGCCAGAGCC AGAATTGGCC
TATTCATTAG ATGCGACTGC ATCTTTCTTA AACTTTGTTA GCTCAAAGAA AACTCACGTT
CTTGAAACAC ACCGTTTTGA CGTGCTTTCT GGCGGTATTA GTACTGCGGG TGAGGCACAA
CTTGTTATCG ATCTTAACAG TGTGAACACA GGTATAGACG TGCGCAACGG ACGTATGCGC
GATTACCTGT TTGAGACTGC AACCTATTCT GTAGCAACCG TGACTGTGCC TGTAGATCTA
GCCGCAGTAG CAGGTTTAGC CGTGGGCGAA GATATGCTGG TGGATGTATC CGCAACTTTG
GATCTTCACG GTGTGCCAGG CGTTATCGAT ACGCAGCTAA ATGTACAGCG CTTATCGGCA
ACTCGCATTA TGGTTCAGAA CCAATCTCCA CTATTAATAA AGGCAGCCGA TTATTCGCTT
GAGGCGGGTA TCGAGACATT GCGTAATCTC GCGAGCCTAA ATGTTATTAG CACCACGGTG
CCAGTGGATT TTGTTTTGTT CTACGAAGCG CCTTAA
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| Protein sequence | MGSSFLTCYK PSKEVITVKR AAINLVLIPG LAVSMGTLSS SAFAQSTCSV DYRVESDWGA
GATHKVLVTN TGAPINGWQM SWTFSGNEQI TNLWNGMFTQ SSQSVIVDSL SWNAQLNTGA
TAEVGFNINS PSGQLPDVYL NGVNCSNPGE PEPEPEPEPE PEPEPEPEPE PEPEPEPEPE
PEPEPEPEPE PEPEPEPELA YSLDATASFL NFVSSKKTHV LETHRFDVLS GGISTAGEAQ
LVIDLNSVNT GIDVRNGRMR DYLFETATYS VATVTVPVDL AAVAGLAVGE DMLVDVSATL
DLHGVPGVID TQLNVQRLSA TRIMVQNQSP LLIKAADYSL EAGIETLRNL ASLNVISTTV
PVDFVLFYEA P
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