| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1142 |
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| Symbol | |
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| ID | 3968386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1478002 |
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| End bp | 1478442 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920213 |
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| Product | cellulose binding, type IV |
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| Protein accession | YP_526616 |
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| Protein GI | 90020789 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGTGTA AGCCAAATAA TACCGGCTTT ACATTGGTCG AACTTATTGC GGTAATCGTC
GTGATTGCCG CACTTTCTGT TACCGTCGTT CAACGGTTAA TTCCCGCTAG TTCCTATCAG
TTACAAGGTG CCCGTGATCA ATTGGTTACG GCTTTTCAAT CTGCCCAGCA ACTTGCAATG
GTACGAACGG CTGCGGTTAG GCTAACTACG TCAGGGTCTC AAATAGATAT ATTACAAGAT
ACTGATAACG ATGGCGTGCC CGACACTAGT GTGACCATTG CAGGGCAAAA TTACCCCCTT
ACGCTTGCTG CGGCGGCAAC CCTTTCATCC GCAAGTTTCG ATTTTGATCG ATTAGGTCAC
ACATCGTCGG CCGTAGTCGT AGTTACGGCT GGTTCTAGCA ATGTTAATGT GAATGTAACC
GCCACAGGCT ATATCTATTA A
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| Protein sequence | MRCKPNNTGF TLVELIAVIV VIAALSVTVV QRLIPASSYQ LQGARDQLVT AFQSAQQLAM
VRTAAVRLTT SGSQIDILQD TDNDGVPDTS VTIAGQNYPL TLAAAATLSS ASFDFDRLGH
TSSAVVVVTA GSSNVNVNVT ATGYIY
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