| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1139 |
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| Symbol | |
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| ID | 3968326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1475694 |
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| End bp | 1476914 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920210 |
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| Product | MSHA biogenesis protein MshG |
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| Protein accession | YP_526613 |
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| Protein GI | 90020786 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAGT TTAAATATTC CGGCCGCTCG AAGCAGGGGC AGGTATTAAC CGGCGAAATG
GAAGCTGCAA CGGTTGATGC GGTGGCGTCG GCACTTATTG GGCGCGGCAT TACACCAGTA
AAAATCGAAC CCTTTTCTGC TGCCTCATCG TATATGCGGC AGCTAAATAG CGCGCTGGGT
GGCGATAAGG TGGGCACTAA CGACCTGATT ATGTTTTGTC GCCAAATGTA CACCATTACC
AAATCGGGTA TTCCACTAAC CCGAGGTATT CGCGGCTTGG GCGCAAGTAT TCGCCACGAG
CACTTTAGAG ATGTACTCGG CGATGTAGCT GAACGTTTAG AGGCTGGTGT AGGCTTGTCG
CAAGCAATGC GTCATCATCC TAAAGTGTTT AATAGTTTAT TTGTAAGCAT GGTTGCTGTG
GGCGAAACCA GCGGCAACCT CGACGAAATA TTTCGCCAAA TAGGTTTTTA CTTAGAGCGC
GACGAAGAAA CACGTAAACG TATTAAGCAA GCAACGCGTT ACCCAACGTT TGTAAGCATC
GCTATTGTGC TGGCAATGGC TGCGGTAAAT ATTTGGGTTG TGCCAGCATT TGCGGATATG
TTTGCCAAAT TTGATGCAGA CCTGCCAATT GTGACCCGTA TTTTAATTTT TACCTCTAAT
GCATTTGTAA ATTATTGGTT ACTTATGTTG GTTGTTGTAG GTGGTATGGT AGGTGGTGCT
TACTATTATT TGAATACGCC AGAGGGAGCG TTGCAGTGGG GTAAAAAGCG GTTAAAAATG
CCGTTGGTTG GCGAGCTAAT CGAGCGCGCT ACCATGGCCC GTTATGCGCG TAGTTTTGGT
TTGATGTTGC GCGCAGGTGT TCCGGTGAAC CAGGCCTTGG CTCTGTGCGC AGCAGCAATC
GACAACCCCT ATATCGCCGC AAAAATACAG CAAATTAGAC AAAGCATTGA GCGCGGTGAA
AGCTTATTGC GTACTCATCT TCAAGCGGAA ATGTTTACAC CACTGGTTTT GCAAATGATA
GCCGTAGGCG AAGAGAGCGG CCAAGTAGAG GCGCTGCTCA CCGAAGTAGC GGAATTCTAC
GAGCGTGAAG TGGACTACGA CTTAAAAACG CTTACCGATC GTATTGAACC TATATTAATT
ATTGTTATGG CGGCGTTTGT GGCTCTGTTA GCTGTAGGCA TTTTTCTCCC AATGTGGAGC
ATGTACGAAG TACAGGCGTA A
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| Protein sequence | MSKFKYSGRS KQGQVLTGEM EAATVDAVAS ALIGRGITPV KIEPFSAASS YMRQLNSALG
GDKVGTNDLI MFCRQMYTIT KSGIPLTRGI RGLGASIRHE HFRDVLGDVA ERLEAGVGLS
QAMRHHPKVF NSLFVSMVAV GETSGNLDEI FRQIGFYLER DEETRKRIKQ ATRYPTFVSI
AIVLAMAAVN IWVVPAFADM FAKFDADLPI VTRILIFTSN AFVNYWLLML VVVGGMVGGA
YYYLNTPEGA LQWGKKRLKM PLVGELIERA TMARYARSFG LMLRAGVPVN QALALCAAAI
DNPYIAAKIQ QIRQSIERGE SLLRTHLQAE MFTPLVLQMI AVGEESGQVE ALLTEVAEFY
EREVDYDLKT LTDRIEPILI IVMAAFVALL AVGIFLPMWS MYEVQA
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