Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1115 |
Symbol | |
ID | 3968302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1442829 |
End bp | 1443182 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637920186 |
Product | ATPase |
Protein accession | YP_526589 |
Protein GI | 90020762 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.474042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTACT TACGCCATTT GTTTAATGGA GAAACGGTAA CCCTGTATGA GTTGGGCGAG GCGATTAAAA TAGGTCGCCA TGCGGATTCG GATATTCGTA TCGAAGACCT TACTGTAAGT GCTACGCATT GTCGTCTAGC TGCCCAAGCC GGTGGCTGGT GGCTTGAAGA TATGCAAAGC ACCAACGGCA CGCTAATGAA TGGCGAGCGA GTAACACGGG TGCAGTTAGC ACCAAACGAC GTGTTTAGTG TGGGGACCCA TGCGTTTGAA TTTTTACCGC AGCTACCAAC TGAGTTTGAT AAAACGCTTA AAATAAAAAA GAGCTGGATA CCCGGTATTT ACTACACCGA ATAG
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Protein sequence | MAYLRHLFNG ETVTLYELGE AIKIGRHADS DIRIEDLTVS ATHCRLAAQA GGWWLEDMQS TNGTLMNGER VTRVQLAPND VFSVGTHAFE FLPQLPTEFD KTLKIKKSWI PGIYYTE
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